DRSC/TRiP Functional Genomics Resources

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Protein Alignment CycG and Ccnj

DIOPT Version :10

Sequence 1:NP_524609.2 Gene:CycG / 43724 FlyBaseID:FBgn0039858 Length:566 Species:Drosophila melanogaster
Sequence 2:NP_766427.1 Gene:Ccnj / 240665 MGIID:2443297 Length:379 Species:Mus musculus


Alignment Length:93 Identity:23/93 - (24%)
Similarity:33/93 - (35%) Gaps:22/93 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 QQLHLQQQYEQYQHYQYQREQDIAYYCQLQAARQQEQ-----LMQQRTSMSSSVMPGLALPQDHQ 89
            |||||                 :|..|.|.|::.:|:     .::|..|:.......|.|.:...
Mouse    80 QQLHL-----------------VALSCLLLASKFEEKEDSVPKLEQLNSLGCMTNMNLVLTKQTL 127

  Fly    90 DHPAALLNGPHNNNIGLAMDAHSINAIL 117
            .|...||......|:.|...||.|...|
Mouse   128 LHMELLLLETFQWNLCLPTAAHFIEYYL 155

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CycGNP_524609.2 CYCLIN_CCNG 273..364 CDD:410227
CcnjNP_766427.1 CYCLIN_CCNJ-like_rpt1 34..140 CDD:410231 17/76 (22%)
CYCLIN_CCNJ-like_rpt2 145..245 CDD:410232 4/11 (36%)
Blue background indicates that the domain is not in the aligned region.

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