DRSC/TRiP Functional Genomics Resources

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Protein Alignment CycG and cyb-2.1

DIOPT Version :9

Sequence 1:NP_001263146.1 Gene:CycG / 43724 FlyBaseID:FBgn0039858 Length:566 Species:Drosophila melanogaster
Sequence 2:NP_502047.1 Gene:cyb-2.1 / 177994 WormBaseID:WBGene00000866 Length:317 Species:Caenorhabditis elegans


Alignment Length:255 Identity:54/255 - (21%)
Similarity:103/255 - (40%) Gaps:48/255 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   203 LAESEAGAVGGASNNNGESSSSLKKLEDQLHALT-SDELYETL----KEYDVLQDKFHTVLLLPK 262
            :.::...|||..:|           ||:.|:.:. ::::|..|    |:| ||.|.|        
 Worm     8 IRKTTKNAVGPRTN-----------LEEVLNCIAMAEDIYNYLVHHEKKY-VLDDSF-------- 52

  Fly   263 ESRREVTAGGRDGSAYVLRCLKMW-------YELPSDVLFSAMSLVDRFLDRMAVKPKHMACMSV 320
                   ..|.:.::.:.|.|..|       :.|..:.|...:.::||.:.:..|.......:.|
 Worm    53 -------INGGNVNSKMRRILVDWLIQVHLRFHLTPETLHLTIFVLDRIIVKNIVSKAEFQLLGV 110

  Fly   321 ASFHLAIKQLD--LKPIPAEDLVTISQCGCTAGDLERMAGVIANKLGVQMGHAPITSVSYLR-IY 382
            |:..:|.|..|  |..|...:::|.:.  .:...:..|...|.|.|...:. .| :|:.:|| |.
 Worm   111 AALFVASKFEDIYLPDILEYEMITDNT--FSKKQIMAMEQTILNALNFDLS-CP-SSLVFLRCIS 171

  Fly   383 YALFRNLAKEIGGDFFKFYQQLIK-LEELENRLEILMCDVKTTVITPSTLALVLICLHLD 441
            ..|..|....|..:.|.:...:.| |.||. .|:.:|..|..:.:..:::.:.|..:.:|
 Worm   172 KTLTENDVNPIDKEAFYYVHNISKCLGELA-LLDSVMSTVPRSHVASASMIITLNVITVD 230

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CycGNP_001263146.1 CYCLIN <287..365 CDD:294043 16/79 (20%)
cyb-2.1NP_502047.1 COG5024 <32..300 CDD:227357 47/220 (21%)
Cyclin_N 34..159 CDD:365896 29/142 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5024
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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