DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CycG and Ccna1

DIOPT Version :9

Sequence 1:NP_001263146.1 Gene:CycG / 43724 FlyBaseID:FBgn0039858 Length:566 Species:Drosophila melanogaster
Sequence 2:NP_001292150.1 Gene:Ccna1 / 12427 MGIID:108042 Length:421 Species:Mus musculus


Alignment Length:411 Identity:92/411 - (22%)
Similarity:155/411 - (37%) Gaps:101/411 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    68 MQQRTSMSSSVMPGLALPQDHQDHPAALLNGPHNNNIGLAMDAHSINAILVDDEQ-PSTSAQAAA 131
            |.:::|.|     |:|||...|...|..:..  ...:|......::..:|.::|| ..|..|...
Mouse     1 MHRQSSKS-----GVALPPVGQGPDACQMLS--RAQLGQDPPQRTVLGVLTENEQYRRTCGQEIT 58

  Fly   132 AAAASAGGSAGAGSGSGLGGAIGGGKLA-NGINRNAEMPTD-WMRIADEGRYGT-PGAAGLEYQK 193
            |....:|       ...:..|.|...|: :|:|..|:...| :|...::|...| .|..|:.::.
Mouse    59 AIRCFSG-------SENVFPAAGKKVLSDHGVNEPAKRGFDIYMDDPEQGDRDTCSGKEGIIFED 116

  Fly   194 -YEQQQQL--EDL-------------------AESEAGAVGGASNNNGESSSSLKKLEDQLHALT 236
             ||....:  .||                   |:||.....|:               |.::...
Mouse   117 VYEVDTSMLKSDLHFLLDFNTVSPMLVDPTTHAQSEEATDFGS---------------DVINVTE 166

  Fly   237 -SDELYETLKEYDVL-QDKFHTVLLLPKESRREVTAGGRDGSAYVLRCLKMW-------YELPSD 292
             ::|::..|:|.:|. :.|.|.:...|     ::|.|.|       ..|..|       |:|.::
Mouse   167 YAEEIHRYLREAEVRHRPKAHYMRKQP-----DITEGMR-------AILVDWLVEVGEEYKLRTE 219

  Fly   293 VLFSAMSLVDRFLDRMAVKPKHMACMSVASFHLAIKQLDLKPIPAEDLVTISQCGCTAGDLERMA 357
            .|:.|::.:||||..|:|....:..:..|:..||.|..::.|...::.|.|:....|...|.||.
Mouse   220 TLYLAVNFLDRFLSCMSVLRGKLQLVGTAAILLASKYEEIYPPDVDEFVYITDDTYTKRQLLRME 284

  Fly   358 GVIANKLGVQMGHAPITS---VSYLRIYYALFR--NLAKEIGGDFFKFYQQLIKLEELENRLEIL 417
            .::...|...: ..|.|:   :.|||......|  ||||         |...:.|.|.:..|:.|
Mouse   285 HLLLKVLAFDL-TVPTTNQFLLQYLRRQGVCIRTENLAK---------YVAELSLLEADPFLKYL 339

  Fly   418 MCDVKTTVITPSTLALVLICL 438
                      ||.:|....||
Mouse   340 ----------PSLVAAAAYCL 350

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CycGNP_001263146.1 CYCLIN <287..365 CDD:294043 21/77 (27%)
Ccna1NP_001292150.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..21 8/24 (33%)
Cyclin_N2 27..>101 CDD:406812 16/80 (20%)
CYCLIN_CCNA1_rpt1 132..294 CDD:410263 39/188 (21%)
CYCLIN_CCNA1_rpt2 298..420 CDD:410266 20/72 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5024
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.