DRSC/TRiP Functional Genomics Resources

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Protein Alignment CycG and ccno

DIOPT Version :9

Sequence 1:NP_001263146.1 Gene:CycG / 43724 FlyBaseID:FBgn0039858 Length:566 Species:Drosophila melanogaster
Sequence 2:NP_001373739.1 Gene:ccno / 101883490 -ID:- Length:300 Species:Danio rerio


Alignment Length:291 Identity:56/291 - (19%)
Similarity:105/291 - (36%) Gaps:68/291 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   251 QDKFHTVLLLPKESRREVTAGGRDGSAYVLRCLKMWYELPSDVLFSAMSLVDRFLDRMAVKPKHM 315
            |.:|..:..|.::.  ::||..|......|..::....|..:....|::::||||...:|.....
Zfish    49 QQQFLALNCLSRQP--QITAEARSKLVSWLIAVRRQLSLSFESCCLAVNIMDRFLITTSVAADCF 111

  Fly   316 ACMSVASFHLAIKQLDLKPIPAEDLVTISQCGCTAGDLERMAG---VIANKLGVQMGHAPITSVS 377
            ..:.|.|..:|.||:::.......|  :|.| |.:...|::..   :|..:|..::. || |...
Zfish   112 QLLGVTSLLIATKQVEVYSPRITQL--LSLC-CNSFSREQLCNLECLILLRLNFRLA-AP-TLAF 171

  Fly   378 YLRIYYALFRNLAKEIGGDFFKFYQQLIKLE--ELENRLEILMCDVKTTVITPSTLALVLICLHL 440
            :|..:.:.|..   ...|:|.......:..|  ..||:...|.|.|       ..|:|.      
Zfish   172 FLDYFTSRFTG---HQTGEFISAQNAHLHKEPSSAENKWRWLACKV-------CELSLA------ 220

  Fly   441 DFHIKESYTRGSPELKHVFEYILFLQQYMRIPDRVFTCGFSIVSGILSHYNGQN----------- 494
                  .||               ..:||  |..:..|...:...:|...:.||           
Zfish   221 ------DYT---------------FNKYM--PSVIAQCALKLAKDLLKTQSVQNSEDNTGASKML 262

  Fly   495 ----KAPY--KQRLVWKLSSRTLRVLRPINR 519
                :||.  :.:|:::.....|::|..:|:
Zfish   263 CCEEEAPLTCENQLLFQQCMEDLKLLVSLNQ 293

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CycGNP_001263146.1 CYCLIN <287..365 CDD:294043 18/80 (23%)
ccnoNP_001373739.1 CYCLIN_SF 68..160 CDD:424085 20/94 (21%)
CYCLIN_SF 167..291 CDD:424085 28/163 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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