DRSC/TRiP Functional Genomics Resources

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Protein Alignment CycG and ap3b2

DIOPT Version :9

Sequence 1:NP_001263146.1 Gene:CycG / 43724 FlyBaseID:FBgn0039858 Length:566 Species:Drosophila melanogaster
Sequence 2:XP_031753531.1 Gene:ap3b2 / 100158619 XenbaseID:XB-GENE-1013377 Length:1175 Species:Xenopus tropicalis


Alignment Length:260 Identity:49/260 - (18%)
Similarity:97/260 - (37%) Gaps:55/260 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 VPVRYSSAAAEYAAEVDCELESTLQQQQQLHLQQQYEQYQHYQYQREQDIAYYCQLQAARQQEQL 67
            :|...|.|.:::|.::      .|.|:....|:..::...|:|.   ..:::....:|...||..
 Frog   617 IPTEKSGALSKHAKKL------FLAQKPAPILESSFKDRDHFQL---GSLSHLLNAKAVGYQELP 672

  Fly    68 MQQRTSMSSSVMPGLALPQDHQDHPAALLNGPHNNNIGLAMDAHSI-----------------NA 115
            .....:...||. .:.:....::..:|    |.:.:|||..:...:                 ..
 Frog   673 DWPEEAPDPSVR-NVEVKDAEEEEDSA----PRDGHIGLLGEWKEVPEWTKCPSREKRKEREEKP 732

  Fly   116 ILVDDE---QPSTSAQA---AAAAAASAGGSAGAGSGSGLGGAIGGGKLANGINRNAEMPTDWMR 174
            ...|.|   .|:.||.:   :.:.:.|.|.|:|:|||||          :.....:.|.......
 Frog   733 FYSDSEGESGPTESADSEPESESESESGGNSSGSGSGSG----------SEEEEESEEEEESEKE 787

  Fly   175 IADEGRYGTPGAAGLEYQKYEQQQQLEDLAES-----EAGAVGGASNNNGES---SSSLKKLEDQ 231
            ...:.:..||.....:....||:|.:.....|     ::.:..|:|:.:.||   |||.::.||:
 Frog   788 EKKKEKKRTPQKEDSDESDQEQKQPIRSKRSSAKTSQKSASEDGSSSESNESETESSSEEEDEDE 852

  Fly   232  231
             Frog   853  852

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CycGNP_001263146.1 CYCLIN <287..365 CDD:294043
ap3b2XP_031753531.1 Adaptin_N 68..620 CDD:396262 1/2 (50%)
HEAT repeat 144..172 CDD:293787
HEAT repeat 178..206 CDD:293787
HEAT repeat 215..241 CDD:293787
AP3B1_C 882..1027 CDD:405483
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5024
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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