DRSC/TRiP Functional Genomics Resources

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Protein Alignment RpL6 and RPL14A

DIOPT Version :9

Sequence 1:NP_651876.1 Gene:RpL6 / 43723 FlyBaseID:FBgn0039857 Length:262 Species:Drosophila melanogaster
Sequence 2:NP_012920.1 Gene:RPL14A / 853864 SGDID:S000001489 Length:138 Species:Saccharomyces cerevisiae


Alignment Length:138 Identity:28/138 - (20%)
Similarity:58/138 - (42%) Gaps:22/138 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   107 KRNTRRNLTPGTVLILLAGRHQGKRVVLLKVLASGLLLVTGPFALNSCPLRRVSQRYVI------ 165
            |.:..|.:..|.|:::..|:..||...:::::....:|:.||.|  ..|.:.::...|:      
Yeast     8 KASNWRLVEVGRVVLIKKGQSAGKLAAIVEIIDQKKVLIDGPKA--GVPRQAINLGQVVLTPLTF 70

  Fly   166 --------GTSSKVDLGAFKVPEHLNDAYFRRLKAKKDKKTGEADIFAAKKERFVPNEQRKKDQK 222
                    .|.||....|....:....::.::: |:::::....|.     |||.....||:.:.
Yeast    71 ALPRGARTATVSKKWAAAAVCEKWAASSWAKKI-AQRERRAALTDF-----ERFQVMVLRKQKRY 129

  Fly   223 EVDAALLK 230
            .|..||.|
Yeast   130 TVKKALAK 137

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RpL6NP_651876.1 Ribosomal_L6e_N <23..>51 CDD:281813
KOW_RPL6 106..262 CDD:240520 28/138 (20%)
RPL14A 111..234 CDD:225074 27/134 (20%)
RPL14ANP_012920.1 KOW_RPL14 15..88 CDD:240512 14/74 (19%)
Ribosomal_L14e 54..128 CDD:396491 13/79 (16%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG2163
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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