DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment RpL6 and AT1G74060

DIOPT Version :9

Sequence 1:	NP_651876.1	Gene:	RpL6 / 43723	FlyBaseID:	FBgn0039857	Length:	262	Species:	Drosophila melanogaster
Sequence 2:	NP_177546.1	Gene:	AT1G74060 / 843746	AraportID:	AT1G74060	Length:	233	Species:	Arabidopsis thaliana

Alignment Length:	259	Identity:	109/259 - (42%)
Similarity:	148/259 - (57%)	Gaps:	39/259 - (15%)

- Green bases have known domain annotations that are detailed below.

  Fly    12 KSAKKGKKHPVNSYLKGGILRYSKAQMYKRRALYRLKDKKSPVV----EKAKV--PIKKVKKIGG 70
            ::||..:    |..|..|:.:||::|||.:|.|:.:|.|...|.    .|:||  |::|..|.
plant     6 RTAKVNR----NPDLIRGVGKYSRSQMYHKRGLWAIKAKNGGVFPRHDAKSKVDAPVEKPPKF-- 64

  Fly    71 PKNGGERTVFLKKSKASYPTKTFVKKRPSKANFSEHKRNTRRNLTPGTVLILLAGRHQGKRVVLL 135
                             ||.:...|..|::......|  .|.::|||||||:||||.:|||||.|
plant    65 -----------------YPAEDVKKPLPNRRTAKPAK--LRASITPGTVLIILAGRFKGKRVVFL 110

  Fly   136 KVLASGLLLVTGPFALNSCPLRRVSQRYVIGTSSKVDLGAFKVPEHLNDAYFRRLKAKKDKKTGE 200
            |.||||||||||||.:|..|||||:|.||||||:|||:....: :..:|.||.::..||.||| |
plant   111 KQLASGLLLVTGPFKINGVPLRRVNQAYVIGTSTKVDISGVTL-DKFDDKYFGKVAEKKKKKT-E 173

  Fly   201 ADIFAAKKE--RFVPNEQRKKDQKEVDAALLKVIKAHPEGKFFAKYLQNMFALHSSQYPHRMRF 262
            .:.|.|:||  :.:| :.:|.|||.|||||:|.|:|.||.|   .||...|:|.....||.:.|
plant   174 GEFFEAEKEEKKEIP-QGKKDDQKAVDAALIKAIEAVPELK---TYLGARFSLKQGMKPHELVF 233

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
RpL6	NP_651876.1	Ribosomal_L6e_N	<23..>51	CDD:281813	11/27 (41%)
		KOW_RPL6	106..262	CDD:240520	83/157 (53%)
		RPL14A	111..234	CDD:225074	72/124 (58%)
AT1G74060	NP_177546.1	Ribosomal_L6e_N	2..61	CDD:367701	19/58 (33%)
AT1G74060	NP_177546.1	KOW_RPL6	81..233	CDD:240520	83/159 (52%)

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Domainoid	1	1.000	85	1.000	Domainoid score	I2820
eggNOG	1	0.900	-	-		E1_COG2163
Hieranoid	1	1.000	-	-
Homologene	1	1.000	-	-		H31001
Inparanoid	1	1.050	159	1.000	Inparanoid score	I1646
OMA	1	1.010	-	-		QHG53785
OrthoDB	1	1.010	-	-		D1227453at2759
OrthoFinder	1	1.000	-	-		FOG0001826
OrthoInspector	1	1.000	-	-		otm3035
orthoMCL	1	0.900	-	-		OOG6_101188
Panther	1	1.100	-	-	LDO	PTHR10715
Phylome	1	0.910	-	-
SonicParanoid	1	1.000	-	-		X1520
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	1	0.960	-	-
	14	13.840