DRSC/TRiP Functional Genomics Resources

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Protein Alignment RpL6 and AT2G20450

DIOPT Version :10

Sequence 1:NP_651876.1 Gene:RpL6 / 43723 FlyBaseID:FBgn0039857 Length:262 Species:Drosophila melanogaster
Sequence 2:NP_179635.1 Gene:AT2G20450 / 816564 AraportID:AT2G20450 Length:134 Species:Arabidopsis thaliana


Alignment Length:74 Identity:19/74 - (25%)
Similarity:35/74 - (47%) Gaps:14/74 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   111 RRNLTPGTVLILLAGRHQGKRVVLLKVLASGLLLVTGP----FALNSCPLRRVSQRYVIGTSSKV 171
            :|.:..|.|.::..|...||.||::.|:.....||..|    ..:|   |:|:|...::     :
plant     4 KRFVEIGRVALVNYGEDYGKLVVIVDVVDQNRALVDAPDMERIQMN---LKRLSLTDIV-----I 60

  Fly   172 DLGAFKVPE 180
            |:.  :||:
plant    61 DIN--RVPK 67

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RpL6NP_651876.1 KOW_RPL6 106..262 CDD:240520 19/74 (26%)
AT2G20450NP_179635.1 PTZ00065 3..126 CDD:240252 19/74 (26%)

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