DRSC/TRiP Functional Genomics Resources

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Protein Alignment RpL6 and RPL6

DIOPT Version :10

Sequence 1:NP_651876.1 Gene:RpL6 / 43723 FlyBaseID:FBgn0039857 Length:262 Species:Drosophila melanogaster
Sequence 2:NP_000961.2 Gene:RPL6 / 6128 HGNCID:10362 Length:288 Species:Homo sapiens


Alignment Length:270 Identity:127/270 - (47%)
Similarity:170/270 - (62%) Gaps:19/270 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 IEKAKKVAKSAKKGKKH-PVNSYLKGGILRYSKAQMYKRRALYRLK--------DKKSPVVEKAK 59
            ::|....||..||||.| ..|..|..||.|||::.||.|:|:|:.|        :||    :|.|
Human    27 VKKGNLKAKKPKKGKPHCSRNPVLVRGIGRYSRSAMYSRKAMYKRKYSAAKSKVEKK----KKEK 87

  Fly    60 VPIKKVKKIGGPKNGGERTVFLKKSKASYPTKTFVKKRPS--KANFSEHKRNTRRNLTPGTVLIL 122
            |.....|.:||.||||.|.|.|:|....|||:...:|..|  |..||:|.|..|.::||||:||:
Human    88 VLATVTKPVGGDKNGGTRVVKLRKMPRYYPTEDVPRKLLSHGKKPFSQHVRKLRASITPGTILII 152

  Fly   123 LAGRHQGKRVVLLKVLASGLLLVTGPFALNSCPLRRVSQRYVIGTSSKVDLGAFKVPEHLNDAYF 187
            |.|||:|||||.||.|||||||||||..||..||||..|::||.||:|:|:...|:|:||.||||
Human   153 LTGRHRGKRVVFLKQLASGLLLVTGPLVLNRVPLRRTHQKFVIATSTKIDISNVKIPKHLTDAYF 217

  Fly   188 RRLKAKKDKKTGEADIFAAKKERFVPNEQRKKDQKEVDAALLKVIKAHPEGKFFAKYLQNMFALH 252
            ::.|.:|.:.. |.:||..:||::...||||.|||.||:.:|..|||.|:   ...||:::|||.
Human   218 KKKKLRKPRHQ-EGEIFDTEKEKYEITEQRKIDQKAVDSQILPKIKAIPQ---LQGYLRSVFALT 278

  Fly   253 SSQYPHRMRF 262
            :..|||::.|
Human   279 NGIYPHKLVF 288

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RpL6NP_651876.1 KOW_RPL6 106..262 CDD:240520 81/155 (52%)
RPL6NP_000961.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..48 8/20 (40%)
Ribosomal_L6e_N 36..95 CDD:427554 23/62 (37%)
KOW_RPL6 136..288 CDD:240520 81/155 (52%)

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