Protein Alignment RpL6 and rpl-6

DIOPT Version :10

• Sequence 1: NP_651876.1
• Gene: RpL6 / 43723
• FlyBaseID: FBgn0039857
• Length: 262
• Species: Drosophila melanogaster
• Sequence 2: NP_498584.1
• Gene: rpl-6 / 176015
• WormBaseID: WBGene00004417
• Length: 217
• Species: Caenorhabditis elegans
• Alignment Length: 252
• Identity: 108/252 - (42%)
• Similarity: 144/252 - (57%)
• Gaps: 43/252 - (17%)

  Fly    17 GKKH-PV---NSYLKGGILRYSKAQMYKRRALYRLKDKKSPVVEKAKVPIKKVKKIGGPKNGGER 77
            ||:: ||   |..|..|:||:|.:::       ||                        |.|.::
 Worm     3 GKRNLPVISRNFDLSPGVLRFSASRL-------RL------------------------KKGEKK 36

  Fly    78 TVFLKKSKASYPTKTFVKKRPSKANFSEHKRNT-RRNLTPGTVLILLAGRHQGKRVVLLKVL-AS 140
            ..|.|.:.|..|.   :::..:|......|..| |:.||||||||:|||||:|||||.||.| .|
 Worm    37 PKFTKDTSAKLPK---LQRNGTKFALGHSKTVTLRKTLTPGTVLIVLAGRHKGKRVVFLKQLPQS 98

  Fly   141 GLLLVTGPFALNSCPLRRVSQRYVIGTSSKVDLGAFKVPEHLNDAYFRRLKAKKDKKTGEADIFA 205
            ||||||||..:|..||||:.|.:||.||.||::...|:|||:||.||:|....  :|||: :|||
 Worm    99 GLLLVTGPHKINGFPLRRIGQAFVIATSLKVNVSGVKIPEHINDEYFKRKSTA--QKTGK-NIFA 160

  Fly   206 AKKERFVPNEQRKKDQKEVDAALLKVIKAHPEGKFFAKYLQNMFALHSSQYPHRMRF 262
            :.|..:..:||||||.|.|||.:|..||.|||.||...||...|:|..:||||:|:|
 Worm   161 SGKTEYTVSEQRKKDIKTVDAPILAAIKKHPEHKFLFGYLGTRFSLGKNQYPHKMQF 217

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
RpL6	NP_651876.1	KOW_RPL6	106..262	CDD:240520	88/157 (56%)
rpl-6	NP_498584.1	KOW_RPL6	63..217	CDD:240520	88/156 (56%)