DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment RpL6 and rpl-14

DIOPT Version :10

Sequence 1:NP_651876.1 Gene:RpL6 / 43723 FlyBaseID:FBgn0039857 Length:262 Species:Drosophila melanogaster
Sequence 2:NP_492576.1 Gene:rpl-14 / 172818 WormBaseID:WBGene00004426 Length:135 Species:Caenorhabditis elegans


Alignment Length:129 Identity:27/129 - (20%)
Similarity:53/129 - (41%) Gaps:16/129 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   117 GTVLILLAGRHQGKRVVLLKVLASGLLLVTGPFA--------LNSCPLRRVSQRYVIGTSSKVDL 173
            |.|:.:.:|:.|||...::.|:....:.:.||.:        |....|.:...:..:|..:|...
 Worm    10 GRVVFIASGKDQGKLAAIVNVIDGNRVQIDGPSSDVTRTVRNLKDLQLTKFVLKLRVGQRTKGVK 74

  Fly   174 GAF---KVPEHLNDAYFRRLKAKKDKKTGEADIFAAKKERFVPNEQRKKDQKEVDAALLKVIKA 234
            .||   ||.|:.....:.:..|::..:....|.     ||:...:.::...:.|...|.|:.||
 Worm    75 AAFDAAKVTENFQKTQWAKKIAQRAIRAKLTDF-----ERYKLMKAKQMRNRIVRVELAKLKKA 133

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RpL6NP_651876.1 KOW_RPL6 106..262 CDD:240520 27/129 (21%)
rpl-14NP_492576.1 eL14 5..123 CDD:467915 22/117 (19%)

Return to query results.
Submit another query.