Sequence 1: | NP_476705.1 | Gene: | rod / 43719 | FlyBaseID: | FBgn0003268 | Length: | 2089 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_012824467.2 | Gene: | kntc1 / 733892 | XenbaseID: | XB-GENE-1011946 | Length: | 2226 | Species: | Xenopus tropicalis |
Alignment Length: | 2417 | Identity: | 477/2417 - (19%) |
---|---|---|---|
Similarity: | 903/2417 - (37%) | Gaps: | 622/2417 - (25%) |
- Green bases have known domain annotations that are detailed below.
Fly 1 MWSNFEASSLED------------ETISNIFSSRGIFQISSEEEVNKYPDVMASVQCGKMVIGID 53
Fly 54 KSLLLLEDELVAKCSFLAFGAAIEAIAISSSGNLIVCGLSDGEVHGVFIKGLLLFSVAVNLEDVS 118
Fly 119 LTGGTFRSIHQ--------LDQRFY--FTCKNGSIY-----SLSDIDE----------------- 151
Fly 152 -TCLETLGNMSLNENETIACEKALLEDV--TIQRLSKGRSSCSVDCAVLLKRLLTGNISAENNQD 213
Fly 214 DLEAQPGLVITGDQSTMNFRNAANDVTRINLPAQYGSLKQIFNLEHYIIALTDSGHLVEICPYTR 278
Fly 279 TVYMCQTTQQKNLLIEDLL----------VMECSEDNIELLVLT-KSTAEGRFIKIVEYPTLNVK 332
Fly 333 NEVEVPDHAWLV--------------------RQPKCAVNLYYLAAKEVNQSSIPSVVEMMLVSE 377
Fly 378 TDPSDRFKKLICKGRLEEAEEFGKQFELCLQPIYEAKAKRILVELCNS----------------- 425
Fly 426 --NSQNV-DTKF-------------QDLLQLLSQVESKAFIKSHRMINLNSRHILERYLHEVKKR 474
Fly 475 LTFEDDEEDMLEIDEQLHRLKTL-AIIDPYE-CNTDWQKFIYDNNLVRMVKSLFNTD---MPTAC 534
Fly 535 LIWRRHSSSILPLLNEDELRTLLGFIPSNTKPFNVVQWLRQ-FIPMVSNTHPSIMPFITDWSIEM 598
Fly 599 TRNLQYS--PHWPDIGLEFCTKILDIFEEIQFTYSD------------VRRQQE---RNVGKLRD 646
Fly 647 LVNALQDLSVLKTNYNMGFTLDNYMQDSIDATALSILQHVQLDK----------LQRLVKNFMYP 701
Fly 702 IFQEKGRQPLDVIKQYISQLV---ASRLSS---SSWLDRAMACIELLHNEDSRLECALSVLQNAP 760
Fly 761 VPWPDTLAPLIRLRAS-THPLAVKINAEY---------------------EIQVIKIMK--VKYG 801
Fly 802 WPADSSDI----------NLELFMMRIVKL----NLPDMLDDISALTKAAPELSTSANFNCCYQM 852
Fly 853 ARR----GQVEMAYEFFKKLNGEKNSKS-AKEVVEIM--------ANILENSSSASFESDIKVQE 904
Fly 905 HL-NVLELFKLFLPHVESVYERRYLVIKHRFRLRKFGILL-----------SCSSELIPLHRRHC 957
Fly 958 LLDEAIERIIERAQATLNVSAFIASEISELCTALGLPKVFGLHRICQRIGCLPLSCALAYHVVSF 1022
Fly 1023 VDCVPANAGEFVNLALELLVQQIESAKGKNQETASSLQLINENDPLSFYLAYELLTSALLHESSR 1087
Fly 1088 RH----------DLVELIKYIRVAVIHY---------------PLDAIKSHYDGKEQAVNEHICR 1127
Fly 1128 ALDGISVALGETTINFSCALNGSFDVKTLTVPTTT-KKRYSVSMFDEVEVQPIQQQ----PQKKS 1187
Fly 1188 VGGRMAIVKFL-----ARTLLLMVIET--------EPNNSLLMQVRNELPENTKADVESACAD-- 1237
Fly 1238 --FFLSLEHLTKVKEHDAWYVMSQYLLDFQKQNCRTKRI-INEGFIT-LQLRRIFR---NAMGSK 1295
Fly 1296 DVNFIELFTMLVVDSEALALL----------EKLSVEVKTDLQKINF-LTLSAMYHEHIEDLDSV 1349
Fly 1350 --HMIRTKRLKLFYYLEFCQQDHRIKGKFNADMD-----NIEDLLKEFHNKQLDVQLLERMSKDF 1407
Fly 1408 GFDYQKILITQILSILSAQELRFEVKRDTFGDEELVMLSSAQEMRDMCQPYINEINNVELFTSKL 1472
Fly 1473 KHFIEDINIYFYELYMCVINILMYFDSAPKEMEIWMNILHFLRHKMITRRRNRPGQVETDTWLKS 1537
Fly 1538 QRENGV-MPKISRYRLPFKPI---VEQPLKDILDSELNVDNCQSWFPLIQMYTALKGSKDSSQNC 1598
Fly 1599 DYFCMSAVKNSISE------YKSKNDSESWSLHPTNNAFLQSILRL---VEKVNNPNKAFLILYF 1654
Fly 1655 VSNYARDGADQVEASYEC------WK---FVKEKGHLITDPKSREQVAKVKRRYPIQKTQHLLYV 1710
Fly 1711 YGLTDEKLLRQVENPTELIQALYHHELILKSSKV-------DINALVAEIAKLHDLCLATIQYRL 1768
Fly 1769 LQKWL---ALTMESAGDGTILEETFMEEQNWPEQANGAESSNSQDASENVNRAFYILSSWPKAEA 1830
Fly 1831 VKFLVGLIFKGGSVNTSTQL------QMYECYSKLNDGSNSFTNTISQRQFISIK-----CVH-- 1882
Fly 1883 ELKALGYKSNLEKFSDDHCN-KIDILKMIWQRNAQNPLSLEVMANICLGFDIHLPQIWNGILKRM 1946
Fly 1947 VMFHMVRELNALLDVLSCRPHLLHLDGLAQAWDYVLCHPLQNAVELRSFKQEEVLHKTLLRLQGC 2011
Fly 2012 PVVHALNLL----QFAQL--------CIVVHRPHM------AASLLSFCQSSEQRQKIKKMIHSH 2058
Fly 2059 PVENLRQQILDL 2070 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
rod | NP_476705.1 | Rod_C | 1544..2082 | CDD:287465 | 128/590 (22%) |
kntc1 | XP_012824467.2 | Rod_C | 519..>774 | CDD:402219 | 60/273 (22%) |
Rod_C | 1593..2141 | CDD:402219 | 127/590 (22%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 144 | 1.000 | Domainoid score | I4602 |
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 257 | 1.000 | Inparanoid score | I3072 |
OMA | 1 | 1.010 | - | - | QHG52014 | |
OrthoDB | 1 | 1.010 | - | - | D122381at2759 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0007375 | |
OrthoInspector | 1 | 1.000 | - | - | oto104975 | |
Panther | 1 | 1.100 | - | - | LDO | PTHR15688 |
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R3830 |
SonicParanoid | 1 | 1.000 | - | - | X6266 | |
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
10 | 10.200 |