DRSC/TRiP Functional Genomics Resources

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Protein Alignment pygo and pygo2

DIOPT Version :9

Sequence 1:NP_651872.1 Gene:pygo / 43718 FlyBaseID:FBgn0043900 Length:815 Species:Drosophila melanogaster
Sequence 2:XP_031746422.1 Gene:pygo2 / 779930 XenbaseID:XB-GENE-6454464 Length:390 Species:Xenopus tropicalis


Alignment Length:415 Identity:113/415 - (27%)
Similarity:149/415 - (35%) Gaps:115/415 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   461 TLTPTSTATSMSTSVP-----TSSPAPPAMSPHHSLNSAGPSPGMPNSGPSPLQSPAGPNGP--N 518
            ||......|.|....|     .|:...||.|  |....|.|        |:|:......:.|  :
 Frog    12 TLPGRRAKTGMQMKSPEKKRRKSNTQGPAYS--HLSEFAPP--------PTPMVDHLVASNPFED 66

  Fly   519 NNNSNNNNGPMMGQMIPNAVPMQHQQHMGGGP----PGHGPGPMPGMGMNQMLPPQQPSHLGPPH 579
            :..:...|.......:.|.||..:.:..||.|    ||:..||.|   :.:..||..|:.:.|..
 Frog    67 DFGAPKVNAAASSPFLNNPVPFGNYRMQGGMPHQMAPGYPGGPQP---IRRQAPPFPPNQMAPGF 128

  Fly   580 PNMMNHPHHPHHHPG-----GPPPHMMGGPGMHGGPAGMPPHMGGGPNPHMMGGPHGNAGPHMGH 639
            . |..:|:  :|.||     .||.:...|... ..|||           .|:.||.|..||.|. 
 Frog   129 A-MSQNPN--YHQPGNMNFSNPPFNQAMGQSF-SPPAG-----------QMIQGPVGGFGPMMS- 177

  Fly   640 GHMGGVP----GPGPGPGGMNGPPHPHMSPHHGHPHHHHNPMGGPGPNMFGGGGGGPMGPGGPMG 700
            .:||..|    ||||......|||........||      |.|.|           |:.......
 Frog   178 PNMGQPPRGEMGPGPVLNSPGGPPFSQRFGPSGH------PFGQP-----------PVPRPSLPP 225

  Fly   701 NMGPMGGGPMGGPMGVGPKPMTMGGGKMYPP----------GQPMVFNPQNPNAPP--------- 746
            |..|..|.....|.||...     |..:.||          |.|...|...||..|         
 Frog   226 NTSPFAGADQSFPPGVEEH-----GKNINPPSNTFTQEQHVGSPSAVNGNQPNFTPNNSARGNSS 285

  Fly   747 -------------------------IYPCGMCHKEVNDNDEAVFCESGCNFFFHRTCVGLTEAAF 786
                                     |||||.|.:||||:.:|:.||:.|..:|||.|.|:||:|:
 Frog   286 TPEVNNIPPPSKPTGNSGHQPPPGLIYPCGACEREVNDDQDAILCEASCQKWFHRECTGMTESAY 350

  Fly   787 QMLNKEVFAEWCCDKCVSSKHIPMV 811
            .:|.:||.|.|.||.|:.:|.|..|
 Frog   351 SLLTREVSAVWACDYCLKTKDIQSV 375

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pygoNP_651872.1 PHD_dPYGO 749..802 CDD:277107 27/52 (52%)
pygo2XP_031746422.1 PABP-1234 <151..294 CDD:130689 42/177 (24%)
PHD_PYGO2 313..366 CDD:277106 27/52 (52%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0004253
OrthoInspector 1 1.000 - - oto103847
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.000

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