DRSC/TRiP Functional Genomics Resources

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Protein Alignment pygo and Pygo1

DIOPT Version :9

Sequence 1:NP_651872.1 Gene:pygo / 43718 FlyBaseID:FBgn0043900 Length:815 Species:Drosophila melanogaster
Sequence 2:NP_082392.1 Gene:Pygo1 / 72135 MGIID:1919385 Length:417 Species:Mus musculus


Alignment Length:602 Identity:122/602 - (20%)
Similarity:182/602 - (30%) Gaps:242/602 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly   238 GGMSPMGGMGGPSISPHHMGMGGLSPMGGGPNGPNPRA-MQGS---PMG--GPGQNSPMNSLPMG 296
            ||.|.:.|:|||:|..            |.|:....:| .|||   |:.  .|..|...:.|...
Mouse    17 GGDSGLDGLGGPNIQL------------GSPDKKKRKANTQGSSFPPLSEYAPPPNPNSDHLVAA 69

  Fly   297 SPMGNPIGS----PLGPPSGP--GPGNPGNTGGPQQQQQQPPQPP-MNNGQMGPPPLHS---PLG 351
            :|..:...:    || |.|.|  |||.|| .||....:..|..|| |::...||..|.:   |..
Mouse    70 NPFDDSYNTISYKPL-PSSNPYLGPGYPG-FGGYSTFRMPPHVPPRMSSPYCGPYSLRNQPHPFP 132

  Fly   352 NGPTGHGSHMPGGPIPGPGPGPGGLVGPGGISPAHGNNPGGSGNNMLGGNPGGGNSNNNGSNTSN 416
            ..|.|.|.:.|                       |..|.|...|:..|..|        .:|...
Mouse   133 QNPLGMGFNRP-----------------------HAFNFGPHDNSNFGNPP--------YNNVLT 166

  Fly   417 ASNNNQNPHLSPAAGRLGVPTSMQSNGPSVSSVASSSVPSPATPTLTPTSTATSMSTSVPTSSPA 481
            ...|....|.            .|.:..:.|.:...:|...:.|.|                   
Mouse   167 QDINMPGQHF------------RQGSAENFSQIPPQNVGQVSNPDL------------------- 200

  Fly   482 PPAMSPHHSLNSAGPSPGMPNSGPSPLQSPAGPNGPNNNNSNNNNGPMMGQMIPNAVPMQHQQHM 546
                       ::..:||..::..|||::         |:|          .||           
Mouse   201 -----------ASNFAPGNNSNFTSPLET---------NHS----------FIP----------- 224

  Fly   547 GGGPP---GHGPGPMPGMGMNQ--MLPPQQPSHLGPPHPNMMNHPHHPHHHPGGPPPHMMGGPGM 606
               ||   |....|:|.....|  ...|.|.|...|||.||.:                      
Mouse   225 ---PPNAFGQAKAPLPKQDFTQGATKTPNQNSSTHPPHLNMED---------------------- 264

  Fly   607 HGGPAGMPPHMGGGPNPHMMGGPHGNAGPHMGHGHMGGVPGPGPGPGGMNGPPHPHMSPHHGHPH 671
                                  |...:...:.:.:...|.......|....            .:
Mouse   265 ----------------------PVNQSNVELKNVNRNNVVQENSRSGSAEA------------TN 295

  Fly   672 HHHNPMGGPGPNMFGGGGGGPMGPGGPMGNMGPMGGGPMGGPMGVGPKP-MTMGGGKMYPPGQPM 735
            :|.|                                       |...|| ...|...:..|.:..
Mouse   296 NHAN---------------------------------------GTQNKPRQPRGAADLCTPDKSR 321

  Fly   736 VFN--PQ---NPNAPPIYPCGMCHKEVNDNDEAVFCESGCNFFFHRTCVGLTEAAFQMLNKEVFA 795
            .|:  |.   :.::.|:||||:|..||||:.:|:.||:.|..:|||.|.|:||.|:.:|..|..|
Mouse   322 KFSLLPSRHGHSSSDPVYPCGICTNEVNDDQDAILCEASCQKWFHRICTGMTETAYGLLTAEASA 386

  Fly   796 EWCCDKCVSSKHIPMVK 812
            .|.||.|::.|.:.:::
Mouse   387 VWGCDTCMADKDVQLMR 403

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pygoNP_651872.1 PHD_dPYGO 749..802 CDD:277107 26/52 (50%)
Pygo1NP_082392.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..71 18/65 (28%)
Nuclear localization signal. /evidence=ECO:0000255 35..41 1/5 (20%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 175..265 29/208 (14%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 284..318 7/84 (8%)
PHD_PYGO1 339..395 CDD:277105 28/55 (51%)
Interaction with H3K4me2. /evidence=ECO:0000250 339..386 23/46 (50%)
Interaction with BCL9. /evidence=ECO:0000250 371..389 7/17 (41%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167837987
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0004253
OrthoInspector 1 1.000 - - otm43414
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR23194
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4735
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
66.060

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