DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment pygo and Pygo2

DIOPT Version :9

Sequence 1:NP_651872.1 Gene:pygo / 43718 FlyBaseID:FBgn0043900 Length:815 Species:Drosophila melanogaster
Sequence 2:NP_001280697.1 Gene:Pygo2 / 68911 MGIID:1916161 Length:405 Species:Mus musculus


Alignment Length:562 Identity:153/562 - (27%)
Similarity:188/562 - (33%) Gaps:218/562 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly   289 PMNSLPMGSPMGNPIGSPLGPPSGPGPGNPG-------------NTGGPQQQ---QQQPPQPPMN 337
            |.:.|..||   .|...|..|.:|...|..|             ||.||...   :..||..||.
Mouse     8 PPDKLEGGS---GPAPPPAPPSTGRKQGKAGLQMKSPEKKRRKSNTQGPAYSHLTEFAPPPTPMV 69

  Fly   338 NGQMGPPPLHSPLGNGPTGHGSHMP--GGPIPGPGPGPGGLVGPGGISPAHGNNPGGSGNNMLGG 400
            :..:...|.....| .|...|:..|  |.|:|.     ||....||::   |..|.|.|.     
Mouse    70 DHLVASNPFEDDFG-APKVGGAGPPFLGSPVPF-----GGFRVQGGMA---GQVPPGYGT----- 120

  Fly   401 NPGGGNSNNNGSNTSNASNNNQNPHLSPAAGRLGVPTSMQSNGPSVSSVASSSVPSPATPTLTPT 465
              |||                            |.|..::...|                     
Mouse   121 --GGG----------------------------GGPQPLRRQPP--------------------- 134

  Fly   466 STATSMSTSVPTSSPAPPAMSPHHSLNSAGPSPGMPNSGPSPLQSPAG----PNGPNNNNSNNNN 526
                          |.||        |..||:..||..||.  ..|.|    |:.|.|.:...|.
Mouse   135 --------------PFPP--------NPMGPAFNMPPQGPG--YPPPGNMNFPSQPFNQSLGQNF 175

  Fly   527 GPMMGQMIPNAVPMQHQQHMGGGPPGHGPGPM--PGMGMNQMLPPQQPSHLGPPHPNMMNHPHHP 589
            .|..||::|             ||.| |.|||  |.||.    ||:  ..||||           
Mouse   176 SPPGGQVMP-------------GPVG-GFGPMISPTMGQ----PPR--GELGPP----------- 209

  Fly   590 HHHPGGPPPHMMGGPGMHGGPAGMPPHMGGGPNPHMMGGPHGNAGPHMGHGHMGGVPGPG-PGPG 653
                  |.|.....||...||:...|..|....|       .|..|..|       |.|| ||||
Mouse   210 ------PLPQRFTQPGAPFGPSLQRPGQGLPSLP-------PNTSPFPG-------PDPGFPGPG 254

  Fly   654 GMNG-----PPHP---HMSPHHGHPHH--HHNPMGGPGPNMFGGGGGGP----MGPGGPMGNMGP 704
            |.:|     ||.|   ...||.|.|..  :.|....| |:..|.|||.|    :.|.|..|.   
Mouse   255 GEDGGKPLNPPAPTAFPQEPHSGSPAAAVNGNQPSFP-PSSSGRGGGTPDANSLAPPGKAGG--- 315

  Fly   705 MGGGPMGGPMGVGPKPMTMGGGKMYPPGQPMVFNPQNPNAPPIYPCGMCHKEVNDNDEAVFCESG 769
                      |.||:|         |||.             :||||.|..||||:.:|:.||:.
Mouse   316 ----------GSGPQP---------PPGL-------------VYPCGACRSEVNDDQDAILCEAS 348

  Fly   770 CNFFFHRTCVGLTEAAFQMLNKEVFAEWCCDKCVSSKHIPMV 811
            |..:|||.|.|:||:|:.:|..|..|.|.||.|:.:|.|..|
Mouse   349 CQKWFHRECTGMTESAYGLLTTEASAVWACDLCLKTKEIQSV 390

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pygoNP_651872.1 PHD_dPYGO 749..802 CDD:277107 26/52 (50%)
Pygo2NP_001280697.1 PHD_PYGO2 328..381 CDD:277106 26/52 (50%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167837986
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_28KAX
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0004253
OrthoInspector 1 1.000 - - otm43414
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR23194
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4735
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
65.960

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