DRSC/TRiP Functional Genomics Resources

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Protein Alignment pygo and pygo2

DIOPT Version :9

Sequence 1:NP_651872.1 Gene:pygo / 43718 FlyBaseID:FBgn0043900 Length:815 Species:Drosophila melanogaster
Sequence 2:NP_001028283.2 Gene:pygo2 / 613247 ZFINID:ZDB-GENE-050809-108 Length:571 Species:Danio rerio


Alignment Length:797 Identity:238/797 - (29%)
Similarity:296/797 - (37%) Gaps:280/797 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    37 SNPKKRRKTSSAANSAAAVAAAAAAAAAANSMQQQQAPPTPQDLLPPPPMGGFGDTIIASNPFDD 101
            |..||:||::|             ..||.:.:.:...||||           ..|.::|||||||
Zfish    18 SPEKKKRKSNS-------------QGAAFSHLSEFAPPPTP-----------MVDHLVASNPFDD 58

  Fly   102 SPQVSAMSSSAAAAMAAMNQMGGGPGGGHF------GGGGPGGHPHWEDRMGMGGGPPPPPHMHP 160
              .....|.||.         ||||||..|      ||||.||.......||..||         
Zfish    59 --DFGPPSRSAG---------GGGPGGATFLPSPGAGGGGYGGPGRMGGGMGFMGG--------- 103

  Fly   161 HMHPHHPGGPMGHPHGPHPHMGGPPPMRGMSPMHPHQMGPGPGVGLPPHMNHGRPGGPGGPGGPV 225
                  ||||.....|..|..|.|.|..|  |.||...|..||.|          ||.||.||  
Zfish   104 ------PGGPGSGQPGRRPPFGPPTPNTG--PHHPLGFGGMPGFG----------GGGGGGGG-- 148

  Fly   226 PMGSPMGGIAGMGGMSPMGGMGGPS--------ISPHHMGMGGLSPMGGGPNGPNPRAMQGSPMG 282
                      |.||..|    ||||        ..|.|.|. |.:||      .:|.||.|.|.|
Zfish   149 ----------GGGGFPP----GGPSQFNMPPNFSPPMHPGQ-GFNPM------LSPGAMGGGPGG 192

  Fly   283 GPGQNSPMNSLPMGSPM----GNPIGSPLGPPSGPGPGNPGNTGGPQQQQQQPPQPPMN-NGQMG 342
            |.|...|...:|...|.    |:|..||      |.||.||..|        ||..||| .|.||
Zfish   193 GGGPPHPRFGMPQQQPPHGQGGHPFNSP------PLPGGPGPRG--------PPHGPMNPMGGMG 243

  Fly   343 PPPLHSPLGNGPTGHGSHMPGGPIPGPGPGPGGLVGPGGISPAHGNNP--GGSGNNMLGGNPGGG 405
            ..  .:.:|.|..|.|.:|.||   .||..|.|...|....|..|::|  |..|.|.  |.||||
Zfish   244 GG--MNMMGMGGGGGGGNMVGG---HPGMPPQGQFPPPQDGPYPGSSPPVGEEGKNF--GGPGGG 301

  Fly   406 NSNNNGSNTSNASNNNQNPHLSPAAGRLGVPTSMQSNGPSVSSVASSSVPSPATPTLTPTSTATS 470
                     ....:..|.|:|:|:    |.|::..:.|||         |:|..|         .
Zfish   302 ---------PPVPSQQQPPNLNPS----GPPSNNATPGPS---------PAPGHP---------Q 335

  Fly   471 MSTSVPTSSPAPPAMSPHHSLNSAGPSPGMPNSGPSPLQSPAGPNGPNNNNSNNNNGPMMGQMIP 535
            .....|...|.|   :|:        :||.|.|.|.|      || ||::.:...|||.     |
Zfish   336 PGGGFPQDVPQP---NPN--------TPGQPQSVPQP------PN-PNSSPTGPLNGPQ-----P 377

  Fly   536 NAVPMQHQQHMGGGPPGHGPGPMPGMGMNQMLPPQQPSHLGPPHPNMMNHPHHPHHH-PGGPPPH 599
            .|...||.      ||....||.|....||    |||:   ||:....:.|:...:: ||||.|:
Zfish   378 QAPNNQHP------PPNSTGGPGPNTPSNQ----QQPT---PPNSAPGSTPYSQQNNTPGGPMPN 429

  Fly   600 MMGGPGMHGGPAGMPPHMGGGPNPHMMGGPHGNAGPHMGHGHMGGVPGPGPGPGGMNGPPHPHMS 664
                         .||                |:..:..:.:..|...||..|   |.|.:.:.:
Zfish   430 -------------QPP----------------NSNQNNLNNNSSGSNTPGSNP---NPPSNSNST 462

  Fly   665 PHHGHPHHHHNPMGGPGPNMFGGGGGGPMGPGGPMGNMGPMGGGPMGGPMGVGPKPMTMGGGKMY 729
            |:...|.                       |.||    .|...||..||    ||   :|||   
Zfish   463 PNTQSPL-----------------------PSGP----APPSSGPGSGP----PK---LGGG--- 490

  Fly   730 PPGQPMVFNPQNPNAPPIYPCGMCHKEVNDNDEAVFCESGCNFFFHRTCVGLTEAAFQMLNKEVF 794
                 |||           |||:|..||:|:.||:.||:.|..:|||.|.||||.|:.:|.:|..
Zfish   491 -----MVF-----------PCGLCMSEVHDDQEAILCEASCQRWFHRDCTGLTEPAYGLLTRESA 539

  Fly   795 AEWCCDKCVSSKHIPMV 811
            |.|.||.|:.:|.|..|
Zfish   540 AVWACDFCLKTKEIQAV 556

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pygoNP_651872.1 PHD_dPYGO 749..802 CDD:277107 27/52 (52%)
pygo2NP_001028283.2 PHD_PYGO2 494..547 CDD:277106 27/52 (52%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170581785
Domainoid 1 1.000 196 1.000 Domainoid score I3093
eggNOG 1 0.900 - - E1_28KAX
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 196 1.000 Inparanoid score I3804
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0004253
OrthoInspector 1 1.000 - - otm24444
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR23194
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4735
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
88.010

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