DRSC/TRiP Functional Genomics Resources

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Protein Alignment pygo and lgs

DIOPT Version :9

Sequence 1:NP_651872.1 Gene:pygo / 43718 FlyBaseID:FBgn0043900 Length:815 Species:Drosophila melanogaster
Sequence 2:NP_651922.1 Gene:lgs / 43791 FlyBaseID:FBgn0039907 Length:1469 Species:Drosophila melanogaster


Alignment Length:930 Identity:205/930 - (22%)
Similarity:271/930 - (29%) Gaps:348/930 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 PTDIIS---APSNPKKRRKTSSAANSAAAVAAAAAAAAAANSM--QQQQAP-----PTPQDLLPP 83
            |.|:||   |.......:|||....|...|.....||....:|  ....||     .:..|:|  
  Fly   612 PGDVISDMGAVIGCNNNQKTSVQCGSGVGVVTGTTAAGVNVNMHCSSSGAPNGNMMGSSTDML-- 674

  Fly    84 PPMGGFGDT---IIASNPFDDSPQVSAMSSSAAAAMAAMNQMGGGPGGGHF-----GGGGPGG-- 138
               ..||:|   :|.:.| |.|.:|....|...:....:.||........|     .||.|..  
  Fly   675 ---ASFGNTSCNVIGTAP-DMSKEVLNQDSRTHSHQGGVAQMEWSKIQHQFFEERLKGGKPRQVT 735

  Fly   139 ---HPHWEDRMGMGG-----------GPPPPPHMHPHMHPHHPGGPMGHPHGPHPHMGGPPPMRG 189
               .|..:...|.||           |||||                  .|........|...:.
  Fly   736 GTVVPQQQTPSGSGGNSLNNQVRPLQGPPPP------------------YHSIQRSASVPIATQS 782

  Fly   190 MSPMHPHQMG-PGPG-----VGLP---PHMNHGRPGGPGGPGGPVPMGSPMGGIAGMGGM----- 240
            .:|..|:.:. |.|.     :|||   |.|:     |.|...|.||..:.....||...:     
  Fly   783 PNPSSPNNLSLPSPRTTAAVMGLPTNSPSMD-----GTGSLSGSVPQANTSTVQAGTTTVLSANK 842

  Fly   241 --------SPMG-----GMGGPSISPHHMG------MGGLSP-----MGGGPNGPNPRAMQGSPM 281
                    ||..     ..|..|:..|::.      :..|||     .|....|.|.::.:.||.
  Fly   843 NCFQADTPSPSNQNRSRNTGSSSVLTHNLSSNPSTPLSHLSPKEFESFGQSSAGDNMKSRRPSPQ 907

  Fly   282 GGPGQNSPMNSL---------PMGSPMGNP----------------IGS---------------- 305
               ||.||:|||         ...||..||                :||                
  Fly   908 ---GQRSPVNSLIEANKDVRFAASSPGFNPHPHMQSNSNSALNAYKMGSTNIQMERQASAQGGSV 969

  Fly   306 ---------PLGPPSGPGPGNPGNTGGPQQQQQQPPQPPMNNGQMGP------PPLHSPLGNGPT 355
                     ||.|.||..|        |..:..|...|..:..||..      ..:.||.|.|  
  Fly   970 QFSRRSDNIPLNPNSGNRP--------PPNKMTQNFDPISSLAQMSQQLTSCVSSMGSPAGTG-- 1024

  Fly   356 GHGSHMPGGPIPGPGPGP--------GGLVGPGGISPAHGNN---------------------PG 391
              |..|.|    ||||..        .||.| .||...:.||                     ..
  Fly  1025 --GMTMMG----GPGPSDINIEHGIISGLDG-SGIDTINQNNCHSMNVVMNSMGPRMLNPKMCVA 1082

  Fly   392 GSGNNMLGGNP----GGGNSNNNGSNTSNASNNNQNPHLSPAAGRLG-VPTSMQSN-GPSVSSVA 450
            |..|...|.||    ||...|:.||...:|:::|....:.|.|..:| :|.:..|| .|::...|
  Fly  1083 GGPNGPPGFNPNSPNGGLRENSIGSGCGSANSSNFQGVVPPGARMMGRMPVNFGSNFNPNIQVKA 1147

  Fly   451 SSSVPSPATPTLTP--TSTATSMSTSVPTSSPAPPAMSPHHSLNSAGPSPGMPNSGPSPLQSPAG 513
            |    :|.|....|  ...|.:.:.:...:...||::  ......|.|..|...:| ||:..|:.
  Fly  1148 S----TPNTIQYMPVRAQNANNNNNNGANNVRMPPSL--EFLQRYANPQMGAVGNG-SPICPPSA 1205

  Fly   514 PNGPNNNNSNNNNGPMMGQMIPNAVPMQHQQHMGGGPPGHGPGPMPGMGM----NQMLPPQQPSH 574
            .:| .........||..|.|:.|:...|||..:     .:.||...|:..    |||....:...
  Fly  1206 SDG-TPGMPGLMAGPGAGGMLMNSSGEQHQNKI-----TNNPGASNGINFFQNCNQMSIVDEEGG 1264

  Fly   575 LGPPHPNMMNHPHHPHHHPGGPP-------PHMMGGPGMHGGPAGMPP--------------HMG 618
            | |.|...||.         |.|       ||.| .|.:.|  |.|||              ...
  Fly  1265 L-PGHDGSMNI---------GQPSMIRGMRPHAM-RPNVMG--ARMPPVNRQIQFAQSSDGIDCV 1316

  Fly   619 GGPNPHMMGGPHGNAGPHM---------------------------------------GHGHMGG 644
            |.|:.........:|||||                                       |.||..|
  Fly  1317 GDPSSFFTNASCNSAGPHMFGSAQQANQPKTQHIKNIPSGMCQNQSGLAVAQGQIQLHGQGHAQG 1381

  Fly   645 VPGPGP----------------GPGGMN--GPPHPHM---------------------SPHHGHP 670
            ....||                |..|:|  ||....:                     ...|.|.
  Fly  1382 QSLIGPTNNNLMSTAGSVSATNGVSGINFVGPSSTDLKYAQQYHSFQQQLYATNTRSQQQQHMHQ 1446

  Fly   671 HHHHN-----PMGGPGPNMF 685
            .|..|     |...|.|..|
  Fly  1447 QHQSNMITMPPNLSPNPTFF 1466

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pygoNP_651872.1 PHD_dPYGO 749..802 CDD:277107
lgsNP_651922.1 BCL9 521..559 CDD:288370
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR23194
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

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