Protein Alignment gammaCOP and AT4G31490

DIOPT Version :9

• Sequence 1: NP_001263145.1
• Gene: gammaCOP / 43717
• FlyBaseID: FBgn0028968
• Length: 897
• Species: Drosophila melanogaster
• Sequence 2: NP_001329405.1
• Gene: AT4G31490 / 829276
• AraportID: AT4G31490
• Length: 948
• Species: Arabidopsis thaliana
• Alignment Length: 996
• Identity: 183/996 - (18%)
• Similarity: 361/996 - (36%)
• Gaps: 288/996 - (28%)

  Fly    45 IHILTKILYLINQGEQLVAREATDCFFAMTK-LFQSKDVVLRR--MVYLGIKELS----SIAEDV 102
            :..:.|.:.|:..||.:     ...|..:.: :..|:|..:::  ::||.:.|.:    .:..::
plant    35 VDAMKKAIMLLLNGETI-----PQLFITIIRYVLPSEDHTIQKLLLLYLELIEKTDSKGKVLPEM 94

  Fly   103 IIVTSSLTKDMTGKEDLYRAAAIRALCSITDN--------TMLQAVERYMKQCIVDKNAAVSCAA 159
            |::..:|..::....:..|...:|.||.:.:.        ::||.:|.  :...|.:||.:   |
plant    95 ILICQNLRNNLQHPNEYIRGVTLRFLCRMKETEIVEPLTPSVLQNLEH--RHPFVRRNAIL---A 154

  Fly   160 LVSSLRLAN------TAGDVVKRWANEAQEALNSDNIMVQYHALGLLYHIRKSDRLAVSKL---V 215
            ::|..:|.:      .|.:::::..:..|:.....|..:.....        ::..||:.|   |
plant   155 IMSIYKLPHGDQLFVDAPEMIEKVLSTEQDPSAKRNAFLMLFTC--------AEERAVNYLLSNV 211

  Fly   216 NKLTRGSLKSPYAVCMLIRIACKLIEEEDIPSEELSDSPLFTFIESCLRHKSEMVIYEAAHAIVN 280
            :|::..:......|..|||..||     ..|:|:   ......|.|.|...|..||||.|..:|:
plant   212 DKVSDWNESLQMVVLELIRSVCK-----TKPAEK---GKYIKIIISLLSATSSAVIYECAGTLVS 268

  Fly   281 LKNTNPRMLSPAFSILQLFCSSPKATL------RFAAVRTLNKVAMTH-----PAAVTTCNLDLE 334
            |.:....:.:.|.:..||..|.....:      |...::||::..|..     ..|:::.|||:
plant   269 LSSAPTAIRAAANTYCQLLLSQSDNNVKLILLDRLYELKTLHRDIMVELIIDVLRALSSPNLDI- 332

  Fly   335 GLITDSNRSVATLAITTLLKTGAESSVERLMKQ-ISTFVAEI--SDEFKVVVVQAICALCTKYPR 396
                  .|....:|:..:........|:.|.|: :.|...|:  :.|::.:::|||.|...|:|.
plant   333 ------RRKTLDIALDLITHHNINEVVQMLKKEVVKTQSGELEKNGEYRQMLIQAIHACAVKFPE 391

  Fly   397 KHTVLMNFLSGMLREEGGLEYKTSIVDTII---TIIEENADAKESGLSHLCEFIEDCEHVSLAVR 458
            ..:.:::.|...|    |.....|.:|.::   .|||.|...:.|.::.|.:.........:...
plant   392 VASTVVHLLMDFL----GDSNVASALDVVVFVREIIETNPKLRVSIITRLLDTFYQIRAGKVCPC 452

  Fly   459 ILHLLGK--------------------EGPFAAT--------PSKYIR-----FIYNR--VIL-- 486
            .|.::|:                    |.||.:.        .||.|:     .:.:|  |||
plant   453 ALWIIGEYCLSLSEVESGISTITQCLGELPFYSVSEESEPTETSKKIQPTSSAMVSSRKPVILAD 517

  Fly   487 --------------ESPIV----------RAAAVTAMAQFGA--SC------------------- 506
                          .||.|          ||..:|.....||  :|
plant   518 GTYATQSAASETTFSSPTVVQGSLTSGNLRALLLTGDFFLGAVVACTLTKLVLRLEEVQSSKTEV 582

  Fly   507 -----PALLSNILVL-LGRCQMDP---DDEVRDRATYYLSILNSERPELYKNYIIERENCSLALL 562
                 .|||..:.:| ||:..:.|   |::..:|....:.:|.....|:.|.::   |:|..:.:
plant   583 NKTVSQALLIMVSILQLGQSPVSPHPIDNDSYERIMLCIKLLCHRNVEMKKIWL---ESCRQSFV 644

  Fly   563 ----EKSLVE-----------HLNGD-------VDTRFDISIVPKAAIVKPVIANDVMLVTSSAP 605
                ||.|.|           |...|       :.:|..:|.:.    ::..:.:|:...|.
plant   645 KMISEKQLREMEELKAKTQTTHAQPDDLIDFFHLKSRKGMSQLE----LEDQVQDDLKRATG--- 702

  Fly   606 RPPKITREEESAARLAQLPGIQVLG---PIHRSTAPIQLTESETEYTVQCIKHIFGQHVVFQFDC 667
               :.|::|..|.:|.::  :|:.|   |::          :|...||    |.:  .:..:...
plant   703 ---EFTKDENDANKLNRI--LQLTGFSDPVY----------AEAYVTV----HHY--DIALEVTV 746

  Fly   668 LNTLSDQILENVRVELTLPEGFTTRAVIPCPKLPYNDLQTTFVIVEFP------PDAANSIATFG 726
            :|. :.:.|:|:.:||.                ...||:    :||.|      |:.:..|
plant   747 INR-TKETLQNLCLELA----------------TMGDLK----LVERPQNYSLAPERSMQI---- 786

  Fly   727 ATLRFVVKDCDPNTGEPESEEGYDDEYMLE-------DLELTVADQIQKTRKNNFQVSWDAADSE 784
               :..:|.....||.......|:...::|       |:.:.:.|.|...      |..:.|...
plant   787 ---KANIKVSSTETGVIFGNIVYETSNVMERNVVVLNDIHIDIMDYISPA------VCSEVAFRT 842

  Fly   785 EWLQAEDTFVLSAVTTLQDAVNTIVKILGLGAANLSENVPEGTHLHTLLCSGTFRGGAEIL---V 846
            .|.:.|....::..||:|:            .....:::.:.|::..|.......|....|   :
plant   843 MWAEFEWENKVAVNTTIQN------------EREFLDHIIKSTNMKCLTAPSAIAGECGFLAANL 895

  Fly   847 RAKLALSEGVTLNLTV-RSTD 866
            .||....|...:||:: :.||
plant   896 YAKSVFGEDALVNLSIEKQTD 916

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
gammaCOP	NP_001263145.1	SEC21	11..877	CDD:227565	183/996 (18%)
		HEAT repeat	402..427	CDD:293787	5/27 (19%)
		HEAT repeat	439..465	CDD:293787	2/25 (8%)
		HEAT repeat	475..505	CDD:293787	14/64 (22%)
		HEAT repeat	512..538	CDD:293787	6/29 (21%)
		COP-gamma_platf	620..761	CDD:285908	26/156 (17%)
		Coatomer_g_Cpla	763..877	CDD:292991	20/108 (19%)
AT4G31490	NP_001329405.1	Adaptin_N	21..469	CDD:396262	91/470 (19%)
		Coatamer_beta_C	669..807	CDD:400183	31/193 (16%)
		Coatomer_b_Cpla	813..940	CDD:405492	22/122 (18%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910