Protein Alignment gammaCOP and AT2G16200

DIOPT Version :9

• Sequence 1: NP_001263145.1
• Gene: gammaCOP / 43717
• FlyBaseID: FBgn0028968
• Length: 897
• Species: Drosophila melanogaster
• Sequence 2: NP_001189534.1
• Gene: AT2G16200 / 816117
• AraportID: AT2G16200
• Length: 83
• Species: Arabidopsis thaliana
• Alignment Length: 60
• Identity: 19/60 - (31%)
• Similarity: 33/60 - (55%)
• Gaps: 2/60 - (3%)

  Fly   820 SENVPEGTHLHTLLCSGTFRGGAEILVRAKLAL--SEGVTLNLTVRSTDQDVAELITAAI 877
            :|.|......||.|.||.:.|..::||:|:..:  |:.:.:.|.||:.|..|::.|.|.:
plant    21 TETVASNARSHTCLPSGLYIGNVKVLVKAQFGMDSSKEIVMKLAVRAEDPSVSDAIHALV 80

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
gammaCOP	NP_001263145.1	SEC21	11..877	CDD:227565	19/58 (33%)
		HEAT repeat	402..427	CDD:293787
		HEAT repeat	439..465	CDD:293787
		HEAT repeat	475..505	CDD:293787
		HEAT repeat	512..538	CDD:293787
		COP-gamma_platf	620..761	CDD:285908
		Coatomer_g_Cpla	763..877	CDD:292991	19/58 (33%)
AT2G16200	NP_001189534.1	Coatomer_g_Cpla	<20..80	CDD:292991	19/58 (33%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Domainoid	1	1.000	65	1.000	Domainoid score	I3620
eggNOG	1	0.900	-	-		E1_COG5240
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	1	1.000	-	-		FOG0002163
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	3	2.900