Sequence 1: | NP_001263145.1 | Gene: | gammaCOP / 43717 | FlyBaseID: | FBgn0028968 | Length: | 897 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_989174.1 | Gene: | copg1 / 394781 | XenbaseID: | XB-GENE-919993 | Length: | 874 | Species: | Xenopus tropicalis |
Alignment Length: | 875 | Identity: | 534/875 - (61%) |
---|---|---|---|
Similarity: | 659/875 - (75%) | Gaps: | 10/875 - (1%) |
- Green bases have known domain annotations that are detailed below.
Fly 7 EKDDEEDGPSNAYQNLEKTSVLQETRTFNETPVNPRKCIHILTKILYLINQGEQLVAREATDCFF 71
Fly 72 AMTKLFQSKDVVLRRMVYLGIKELSSIAEDVIIVTSSLTKDMTGKEDLYRAAAIRALCSITDNTM 136
Fly 137 LQAVERYMKQCIVDKNAAVSCAALVSSLRLANTAGDVVKRWANEAQEALNSDNIMVQYHALGLLY 201
Fly 202 HIRKSDRLAVSKLVNKLTRGSLKSPYAVCMLIRIACKLIEEEDIPSEELSDSPLFTFIESCLRHK 266
Fly 267 SEMVIYEAAHAIVNLKNTNPRMLSPAFSILQLFCSSPKATLRFAAVRTLNKVAMTHPAAVTTCNL 331
Fly 332 DLEGLITDSNRSVATLAITTLLKTGAESSVERLMKQISTFVAEISDEFKVVVVQAICALCTKYPR 396
Fly 397 KHTVLMNFLSGMLREEGGLEYKTSIVDTIITIIEENADAKESGLSHLCEFIEDCEHVSLAVRILH 461
Fly 462 LLGKEGPFAATPSKYIRFIYNRVILESPIVRAAAVTAMAQFGASCPALLSNILVLLGRCQMDPDD 526
Fly 527 EVRDRATYYLSILNSERPELYKNYIIERENCSLALLEKSLVEHLNGDVDTRFDISIVPKA-AIVK 590
Fly 591 PVIANDVMLVTSSAPRPPKITREEESAARLAQLPGIQVLGPIHRSTA-PIQLTESETEYTVQCIK 654
Fly 655 HIFGQHVVFQFDCLNTLSDQILENVRVELTLPEGFTTRAVIPCPKLPYNDLQTTFVIVEFPPDAA 719
Fly 720 NSIA-TFGATLRFVVKDCDPNTGEPESEEGYDDEYMLEDLELTVADQIQKTRKNNFQVSWDAADS 783
Fly 784 EEWLQAEDTFVLSAVTTLQDAVNTIVKILGLGAANLSENVPEGTHLHTLLCSGTFRGGAEILVRA 848
Fly 849 KLALSEGVTLNLTVRSTDQDVAELITAAIG 878 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
gammaCOP | NP_001263145.1 | SEC21 | 11..877 | CDD:227565 | 531/868 (61%) |
HEAT repeat | 402..427 | CDD:293787 | 17/24 (71%) | ||
HEAT repeat | 439..465 | CDD:293787 | 21/25 (84%) | ||
HEAT repeat | 475..505 | CDD:293787 | 22/29 (76%) | ||
HEAT repeat | 512..538 | CDD:293787 | 19/25 (76%) | ||
COP-gamma_platf | 620..761 | CDD:285908 | 73/142 (51%) | ||
Coatomer_g_Cpla | 763..877 | CDD:292991 | 52/113 (46%) | ||
copg1 | NP_989174.1 | SEC21 | 14..869 | CDD:227565 | 528/861 (61%) |
HEAT repeat | 288..313 | CDD:293787 | 20/24 (83%) | ||
HEAT repeat | 323..354 | CDD:293787 | 26/30 (87%) | ||
HEAT repeat | 357..385 | CDD:293787 | 22/27 (81%) | ||
HEAT repeat | 398..423 | CDD:293787 | 17/24 (71%) | ||
HEAT repeat | 435..461 | CDD:293787 | 21/25 (84%) | ||
HEAT repeat | 471..501 | CDD:293787 | 22/29 (76%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 738 | 1.000 | Domainoid score | I106 |
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 1013 | 1.000 | Inparanoid score | I287 |
OMA | 1 | 1.010 | - | - | QHG53896 | |
OrthoDB | 1 | 1.010 | - | - | D207992at33208 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0002163 | |
OrthoInspector | 1 | 1.000 | - | - | otm48080 | |
Panther | 1 | 1.100 | - | - | O | PTHR10261 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 1 | 1.000 | - | - | X1625 | |
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
10 | 10.080 |