| Sequence 1: | NP_001263145.1 | Gene: | gammaCOP / 43717 | FlyBaseID: | FBgn0028968 | Length: | 897 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_001100399.1 | Gene: | Copg2 / 301742 | RGDID: | 1566215 | Length: | 871 | Species: | Rattus norvegicus |
| Alignment Length: | 878 | Identity: | 523/878 - (59%) |
|---|---|---|---|
| Similarity: | 671/878 - (76%) | Gaps: | 18/878 - (2%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 7 EKDDEEDGP-SNAYQNLEKTSVLQETRTFNETPVNPRKCIHILTKILYLINQGEQLVAREATDCF 70
Fly 71 FAMTKLFQSKDVVLRRMVYLGIKELSSIAEDVIIVTSSLTKDMTGKEDLYRAAAIRALCSITDNT 135
Fly 136 MLQAVERYMKQCIVDKNAAVSCAALVSSLRLANTAGDVVKRWANEAQEALNSDNIMVQYHALGLL 200
Fly 201 YHIRKSDRLAVSKLVNKLTRGSLKSPYAVCMLIRIACKLIEEEDIPSEELSDSPLFTFIESCLRH 265
Fly 266 KSEMVIYEAAHAIVNLKNTNPRMLSPAFSILQLFCSSPKATLRFAAVRTLNKVAMTHPAAVTTCN 330
Fly 331 LDLEGLITDSNRSVATLAITTLLKTGAESSVERLMKQISTFVAEISDEFKVVVVQAICALCTKYP 395
Fly 396 RKHTVLMNFLSGMLREEGGLEYKTSIVDTIITIIEENADAKESGLSHLCEFIEDCEHVSLAVRIL 460
Fly 461 HLLGKEGPFAATPSKYIRFIYNRVILESPIVRAAAVTAMAQFGASCPALLSNILVLLGRCQMDPD 525
Fly 526 DEVRDRATYYLSILNSERPELYKNYIIERENCSLALLEKSLVEHLNGDVDTRFDISIVPKAAIVK 590
Fly 591 PVI--ANDVMLVTSSAPRPPKI--TREEESAARLAQLPGIQVLGPIHRSTAPIQLTESETEYTVQ 651
Fly 652 CIKHIFGQHVVFQFDCLNTLSDQILENVRVELTLPEGFTTRAVIPCPKLPYNDLQTTFVIVEFPP 716
Fly 717 DAANSIA-TFGATLRFVVKDCDPNTGEPESEEGYDDEYMLEDLELTVADQIQKTRKNNFQVSWDA 780
Fly 781 ADSEEWLQAEDTFVLSAVTTLQDAVNTIVKILGLGAANLSENVPEGTHLHTLLCSGTFRGGAEIL 845
Fly 846 VRAKLALSEGVTLNLTVRSTDQDVAELITAAIG 878 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| gammaCOP | NP_001263145.1 | SEC21 | 11..877 | CDD:227565 | 520/871 (60%) |
| HEAT repeat | 402..427 | CDD:293787 | 16/24 (67%) | ||
| HEAT repeat | 439..465 | CDD:293787 | 20/25 (80%) | ||
| HEAT repeat | 475..505 | CDD:293787 | 21/29 (72%) | ||
| HEAT repeat | 512..538 | CDD:293787 | 20/25 (80%) | ||
| COP-gamma_platf | 620..761 | CDD:285908 | 71/141 (50%) | ||
| Coatomer_g_Cpla | 763..877 | CDD:292991 | 47/113 (42%) | ||
| Copg2 | NP_001100399.1 | Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1..20 | 7/13 (54%) | |
| SEC21 | 7..866 | CDD:227565 | 520/870 (60%) | ||
| HEAT 1 | 64..101 | 23/36 (64%) | |||
| HEAT 2 | 283..320 | 28/36 (78%) | |||
| HEAT repeat | 288..313 | CDD:293787 | 19/24 (79%) | ||
| HEAT 3 | 321..355 | 29/33 (88%) | |||
| HEAT repeat | 323..354 | CDD:293787 | 27/30 (90%) | ||
| UNC45-central | 325..497 | CDD:288539 | 131/171 (77%) | ||
| HEAT repeat | 363..385 | CDD:293787 | 19/21 (90%) | ||
| HEAT 5 | 395..430 | 22/34 (65%) | |||
| HEAT repeat | 398..423 | CDD:293787 | 16/24 (67%) | ||
| HEAT repeat | 435..461 | CDD:293787 | 20/25 (80%) | ||
| HEAT 6 | 467..504 | 24/36 (67%) | |||
| HEAT repeat | 471..501 | CDD:293787 | 21/29 (72%) | ||
| HEAT repeat | 508..534 | CDD:293787 | 20/25 (80%) | ||
| COP-gamma_platf | 613..756 | CDD:285908 | 71/143 (50%) | ||
| Coatomer_g_Cpla | 758..870 | CDD:292991 | 47/113 (42%) |
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 1 | 0.930 | - | - | C166339128 | |
| Domainoid | 1 | 1.000 | 734 | 1.000 | Domainoid score | I98 |
| eggNOG | 1 | 0.900 | - | - | E1_COG5240 | |
| Hieranoid | 1 | 1.000 | - | - | ||
| Homologene | 1 | 1.000 | - | - | H56292 | |
| Inparanoid | 1 | 1.050 | 1013 | 1.000 | Inparanoid score | I271 |
| OMA | 1 | 1.010 | - | - | QHG53896 | |
| OrthoDB | 1 | 1.010 | - | - | D207992at33208 | |
| OrthoFinder | 1 | 1.000 | - | - | FOG0002163 | |
| OrthoInspector | 1 | 1.000 | - | - | otm45023 | |
| orthoMCL | 1 | 0.900 | - | - | OOG6_101348 | |
| Panther | 1 | 1.100 | - | - | LDO | PTHR10261 |
| Phylome | 1 | 0.910 | - | - | ||
| SonicParanoid | 1 | 1.000 | - | - | X1625 | |
| SwiftOrtho | 1 | 1.000 | - | - | ||
| TreeFam | 1 | 0.960 | - | - | ||
| 16 | 15.770 | |||||