Protein Alignment gammaCOP and Ap1b1

DIOPT Version :9

• Sequence 1: NP_001263145.1
• Gene: gammaCOP / 43717
• FlyBaseID: FBgn0028968
• Length: 897
• Species: Drosophila melanogaster
• Sequence 2: XP_038947721.1
• Gene: Ap1b1 / 29663
• RGDID: 2064
• Length: 952
• Species: Rattus norvegicus
• Identity: / - (0%)
• Similarity: / - (0%)
• Gaps: / - (0%)

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
gammaCOP	NP_001263145.1	SEC21	11..877	CDD:227565
		HEAT repeat	402..427	CDD:293787
		HEAT repeat	439..465	CDD:293787
		HEAT repeat	475..505	CDD:293787
		HEAT repeat	512..538	CDD:293787
		COP-gamma_platf	620..761	CDD:285908
		Coatomer_g_Cpla	763..877	CDD:292991
Ap1b1	XP_038947721.1	Adaptin_N	11..534	CDD:396262
		HEAT repeat	51..75	CDD:293787
		HEAT repeat	87..114	CDD:293787
		HEAT repeat	121..151	CDD:293787
		HEAT repeat	160..186	CDD:293787
		HEAT repeat	197..228	CDD:293787
		HEAT repeat	392..416	CDD:293787
		HEAT repeat	428..457	CDD:293787
		HEAT repeat	464..494	CDD:293787
		HEAT repeat	505..541	CDD:293787
		Alpha_adaptinC2	729..829	CDD:197886
		B2-adapt-app_C	838..951	CDD:198088

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910