DRSC - DRSC Integrative Ortholog Prediction Tool

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Protein Alignment gammaCOP and AT1G23935

DIOPT Version :9

Sequence 1:	NP_001263145.1	Gene:	gammaCOP / 43717	FlyBaseID:	FBgn0028968	Length:	897	Species:	Drosophila melanogaster
Sequence 2:	NP_001319071.1	Gene:	AT1G23935 / 2745761	AraportID:	AT1G23935	Length:	1282	Species:	Arabidopsis thaliana

Alignment Length:	392	Identity:	80/392 - (20%)
Similarity:	137/392 - (34%)	Gaps:	115/392 - (29%)

- Green bases have known domain annotations that are detailed below.

  Fly    12 EDGPSNAYQNLEKTSVLQETRTFNETPVNPRKCIHILTKILYLINQGEQLVAREATDCFFAMTKL 76
            ||.|.:.::||.|..:                 ||:|....:.:..          :|.    ||
plant   954 EDDPHDRHRNLAKLML-----------------IHMLGYPTHFVQM----------ECL----KL 987

  Fly    77 FQSKDVVLRRMVYLGIKELSSIAEDVIIVTSSLTKDMTGKEDLYRAAAIRALCSITDNTMLQAVE 141
            ..|.....:|:.|||:.        :::||.||.:|:..........|:.||.:|....|...:.
plant   988 IASPGFPEKRIGYLGLM--------LMLVTKSLKQDLNHSNQYVVGLALFALGNICSAEMAPDLA 1044

  Fly   142 RYMKQCIVDKNAAVSCAALVSSLRLANTAGDVVKRWANEAQEALNSDNIMVQYHALGLLYHIRKS 206
            ..:::.:..::..:...|.:.|.|:.....|:|:.:.|.....|...:..|....:.|.|.:...
plant  1045 PEVERLVQFRDPNIRKKAALCSTRIVRKVPDLVENFVNADASLLKEKHHGVLIRGVQLCYELCTI 1109

  Fly   207 DRLAVSKLVNKLTRGSLKSPYAVCMLIRIACKLIEEEDIPSEELSDSPLFTFIESCLRHKSEMVI 271
            :..|:.....|.|.|.:|.                        |.|      |.:|        .
plant  1110 NDEALEYFRTKCTEGLIKF------------------------LRD------ITNC--------A 1136

  Fly   272 YEAAHAIVNLKNTNPRMLSPAFSILQLFCSSPKATLRFAAVRTLNK------VAMTHPAAVTTCN 330
            |:..:.:..:  |:|        .||      :..|||  :|.|.:      ..|||..|..|.:
plant  1137 YQPEYDVAGI--TDP--------FLQ------RRLLRF--LRVLGQGDADASDLMTHILAQVTES 1183

  Fly   331 --LD-LEGLITDSNRSVAT--LAITTLLK--TGAESSVER----LMKQISTFVAEISD---EFKV 381
              :| :|..|...|..:.|  :|...|||  :|..|..||    ::||..:...|:..   ||..
plant  1184 DAVDAIEDAIAGHNSDLTTKVMAFVALLKLSSGFPSISERIKDMIVKQKGSLHLEMQQRAIEFNS 1248

  Fly   382 VV 383
            :|
plant  1249 IV 1250

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
gammaCOP	NP_001263145.1	SEC21	11..877	CDD:227565	80/392 (20%)
		HEAT repeat	402..427	CDD:293787
		HEAT repeat	439..465	CDD:293787
		HEAT repeat	475..505	CDD:293787
		HEAT repeat	512..538	CDD:293787
		COP-gamma_platf	620..761	CDD:285908
		Coatomer_g_Cpla	763..877	CDD:292991
AT1G23935	NP_001319071.1	None
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910