Protein Alignment gammaCOP and scnn1d

DIOPT Version :9

• Sequence 1: NP_001263145.1
• Gene: gammaCOP / 43717
• FlyBaseID: FBgn0028968
• Length: 897
• Species: Drosophila melanogaster
• Sequence 2: XP_031762206.1
• Gene: scnn1d / 100496702
• XenbaseID: XB-GENE-991876
• Length: 604
• Species: Xenopus tropicalis
• Alignment Length: 206
• Identity: 38/206 - (18%)
• Similarity: 74/206 - (35%)
• Gaps: 55/206 - (26%)

  Fly   165 RLANTAGDVVKRWANEAQEALNSDNIMVQYHALGLLYHIRKSDRLAVSKLVNKLTRGSL------ 223
            :|.|::||...:|.....:|::.   ..::|.:.::.:|.     ||..:.|..:|..:
 Frog   188 KLCNSSGDCYYKWFWSGFDAVHE---WYKFHYINIMSNIP-----AVLNIANNFSRDYILTCHFN 244

  Fly   224 KSP-------------YAVCMLIRIACKLIEEEDIPSEELSDSPLFTFIESCLRHKSEMVIYEAA 275
            :.|             |..|..|....|  |.....|.......|...:::.| |.:..::.:||
 Frog   245 EMPCDEREYVHFHHPIYGNCFTINNHWK--ENSWYSSRPGKQYGLSIVVKTDL-HDNMPLLSQAA 306

  Fly   276 HAIVNLKNTN--PRMLSPAFSI---------------LQL-----FCSSPKATLRFAAVRTLNKV 318
            .|.:.:.|.|  |.:....|.|               ::|     .|:|..:.|   .::.|...
 Frog   307 GARIMIHNPNQPPLVEHQGFDIRPGTENSISVKQEEAIRLGGKYSQCTSDGSDL---GIKILYNT 368

  Fly   319 AMTHPAAVTTC 329
            :.|..|.:.:|
 Frog   369 SYTMQACLNSC 379

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
gammaCOP	NP_001263145.1	SEC21	11..877	CDD:227565	38/206 (18%)
		HEAT repeat	402..427	CDD:293787
		HEAT repeat	439..465	CDD:293787
		HEAT repeat	475..505	CDD:293787
		HEAT repeat	512..538	CDD:293787
		COP-gamma_platf	620..761	CDD:285908
		Coatomer_g_Cpla	763..877	CDD:292991
scnn1d	XP_031762206.1	ENaC	18..583	CDD:273304	38/206 (18%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C165165051
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.930