DRSC/TRiP Functional Genomics Resources

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Protein Alignment nyo and CG17111

DIOPT Version :10

Sequence 1:NP_651871.2 Gene:nyo / 43716 FlyBaseID:FBgn0039852 Length:805 Species:Drosophila melanogaster
Sequence 2:NP_651119.2 Gene:CG17111 / 42727 FlyBaseID:FBgn0039048 Length:792 Species:Drosophila melanogaster


Alignment Length:723 Identity:168/723 - (23%)
Similarity:279/723 - (38%) Gaps:156/723 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   148 CLEACQSNESCSAVNY--ETGLC---VLFKTTADKLPGSLSRSQFPVF----TIYAQKSCLGVRP 203
            |...|..:..|.|..:  :|..|   ..|:.|:..|..|   .:.|:.    .::.:|:||.|..
  Fly    87 CWRICNEDPDCIAYVHLLDTDECHGYSYFERTSRYLAIS---GELPLVADGEAVFYEKTCLRVPD 148

  Fly   204 C--SKAWCIDRVQGYRLPEHVKSS-QTVLSRRDCLELCLGETEFTCRSANY---YRHS------- 255
            .  .:.|.:.::.|..|..|.|.: .|:::||:|.|.|..||:|.|.||::   ||::       
  Fly   149 ACRGRLWALTKIPGSTLVYHSKKTISTLVTRRECAERCFFETQFRCLSASFAPSYRNNRERFRGE 213

  Fly   256 -----------GLCELSDMDRITLSAGGSVEPYDGADYLENNCAEE--PSKLCEFKRISGKILKT 307
                       |.|.|||.|:..........||| .:|:||.|.|.  .|..|.::..:......
  Fly   214 AGPGQRPSPRLGRCMLSDRDKTVQPDAFRAAPYD-EEYMENQCHERAIESDNCSYELYANSSFIY 277

  Fly   308 VDSVYQDINTIDECRDLCLN-SPYRCHS---YDYNDTGDMVCRLSHHSRATLTDVMDP-YLDVPE 367
            .::.|..::. .||:.:|.: :.:.|..   |..|......|.|  ||...::  :.| .|.:.|
  Fly   278 AEARYLGLSQ-KECQAMCSHEAKFYCQGVSFYYVNQLSLSECLL--HSEDIVS--LGPRSLKLRE 337

  Fly   368 AATY-ELSACYNVSIECRSGEMITKIRTSKLFDGKVYAKGAPKSCAV--NVNNSLEFDFRMG--Y 427
            .:.| ....|.:|.:.|...||..|......|.||:||....|.|..  :.|.|:....::|  .
  Fly   338 NSVYMRRVKCLDVRVFCTRDEMTIKYNPKDWFVGKIYASMHSKDCLARGSGNGSVLLTLQIGSEV 402

  Fly   428 NDLECNVRQS-----AYGRYMND--IVIQHHDMIVTSSDLGLAVSC-QYDLTNK--TVLNDVDLG 482
            .:..|.:.::     .|.|....  :|||::..:.|..|..:.|.| |.:.|..  ..:.|..:.
  Fly   403 KENRCGILRAYEMTQEYQRTFISALVVIQNNPNVQTQGDRLIKVGCIQSNATTSLGVSVRDSSVD 467

  Fly   483 VTGEIESSLSEEITID----------------------SPNVIMKITSRDGSDMKRMAEVGDPLA 525
            .:..:.|:::.|.:::                      .|::.::|............::|..|.
  Fly   468 SSEPVPSAIALESSLEYTEHMFPHEGVVHYNSSTGPHPHPSISLQILDLSHQHETNDVQIGQNLE 532

  Fly   526 LRFEIVEPNSPYEIF--------------VRELVAMDGSDSAEITLIDANGCPTDQYIMGTIQKL 576
            |  :||...||.::.              ...|||....:...:.|||..|||||..:...::::
  Fly   533 L--QIVAEYSPQQLAEHMELQLAPLPDFRATSLVAKTADNENFVLLIDERGCPTDASVFPALERV 595

  Fly   577 -AQNRKVLLSQFDAFKFPSSEVVQFRALVTPCIPRCEPVICDSEDGASGELKSLVSYGRKKRSVL 640
             ..:|.:|.::|.||||..:..|.|...:..|:.||.|..|.|.           |:.|::|...
  Fly   596 HTASRSMLRARFHAFKFSGTANVSFDVKIRFCVERCSPSNCISS-----------SWQRRRRQAD 649

  Fly   641 NGTDGAEFL-------ISTRHRRDVGPVDDNILLMQSIQITDKFGFQPEDGTTTHGND-SGPHEK 697
            ......|.|       |||  ..||.|..||....|. ::...:..:      .||.| |..:..
  Fly   650 QPDRRPEDLRVQNPVYIST--VVDVAPQPDNFTRSQE-ELPLNYNIR------VHGPDQSNTNSY 705

  Fly   698 AY--------AGVAQDKL----TCLNGYGLIMAGALFLLAQLS-IFGIWKTVQ-----------R 738
            .|        ||: .|.|    .|:|...||.....:|:.|:: :||....:|           |
  Fly   706 LYGERGVLLIAGI-DDPLHLDNVCINQSLLIALFIFWLICQVALLFGCGMVLQRYRRLAKLEDER 769

  Fly   739 RTSKERYL 746
            |...|.||
  Fly   770 RRLHEEYL 777

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nyoNP_651871.2 PAN_1 121..198 CDD:459635 12/58 (21%)
PAN_AP_HGF 208..286 CDD:238532 30/99 (30%)
PAN_1 295..358 CDD:459635 12/66 (18%)
ZP 382..618 CDD:214579 63/286 (22%)
CG17111NP_651119.2 PAN_1 159..255 CDD:459635 30/96 (31%)
PAN_AP_HGF 270..344 CDD:238532 15/78 (19%)
ZP <566..627 CDD:214579 17/60 (28%)

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