DRSC/TRiP Functional Genomics Resources

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Protein Alignment nyo and CG42326

DIOPT Version :10

Sequence 1:NP_651871.2 Gene:nyo / 43716 FlyBaseID:FBgn0039852 Length:805 Species:Drosophila melanogaster
Sequence 2:NP_001286200.1 Gene:CG42326 / 35838 FlyBaseID:FBgn0259226 Length:1376 Species:Drosophila melanogaster


Alignment Length:454 Identity:99/454 - (21%)
Similarity:158/454 - (34%) Gaps:109/454 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    53 GSSTPASTSST-----TTTEGSGDQ---EVATVGSAALAGGGELPKPLVTPIEAQPEAKTDKAPA 109
            |||..:|:||:     |.::...||   ....:|:........|..|.....:..|..:.|....
  Fly   797 GSSKHSSSSSSSYWGLTESQRRKDQHDFNYFQLGAPHRESNSVLSYPGSGYEDDYPRRRNDYRQQ 861

  Fly   110 LEEECDPDMIGFEIITGYVLSAPS-KMLDTLPGTLMLTDCLEACQSNES---CSAVNY---ETGL 167
            ......||....:...|:.|...: :....:|   .||:|...|.....   |...:|   :.|.
  Fly   862 WTRRAGPDECSAKTSEGFRLHKTAVRHAYNVP---TLTECERLCSDPRPSFVCHTFSYRYNQAGR 923

  Fly   168 --CVLFKTTADKLPGSLSRSQFPVFTIYAQKSCLGVRPCSK--------------------AWC- 209
              |:|.....:.|...:.......:.||:....:.|  |.:                    |.| 
  Fly   924 DNCMLCDRPINMLDYYVDIEPDRDYDIYSMADDMDV--CRQPPPRRHDTAGPSTAISDPRNAQCF 986

  Fly   210 ---IDRVQGYRLPEHVKSSQTVLSRRDCLELCLGETEFTCRSANY----YRHSGL---CELS--- 261
               ||..:.::  ..|:.|.||.|..:|...|:..|:||||:..:    .||:|:   |:||   
  Fly   987 FRAIDATRFFK--SIVRDSLTVRSVGECEMECIRSTKFTCRAFAFRYGQQRHAGVIDNCQLSDWP 1049

  Fly   262 --DMDR---ITLSAGGSVEPYDGADYLENNCAEEP------SKLCEF-----KRISGKILKTVDS 310
              |||:   :.|.|...:  ::.|.| .:.|..:|      .|||..     .|:....:|.|.|
  Fly  1050 VRDMDKERHLILDAAFDI--FERASY-GHGCEIQPIVDEKHKKLCYLGYGSPARLLPPAIKKVIS 1111

  Fly   311 VYQDINTIDECRDLCLNSPYRCHSYDY-NDTGDMVCRLSHHSRATLTDVMDPYLDVPEAAT---- 370
            |..:|....||......:|::|.::.| :......|.||...:..|..      ||..|.|    
  Fly  1112 VPSEIACKKECIRFRETTPFKCFAFSYGSHASSFNCELSDLDQTELKQ------DVHYAHTKDRD 1170

  Fly   371 YELSACYNVSIECR------SGEMITKIRTSKLF-------------DGKVYAKGAPKSCAVNV 415
            :.|.|.......||      .|..:...|...:|             .||...:.:|  ||.|:
  Fly  1171 FWLFAWNPFDWTCRDKVNTIGGSRVNNDRRMDIFREPGDVAWRHYTVSGKPCRRSSP--CAKNL 1232

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nyoNP_651871.2 PAN_1 121..198 CDD:459635 15/85 (18%)
PAN_AP_HGF 208..286 CDD:238532 28/96 (29%)
PAN_1 295..358 CDD:459635 16/68 (24%)
ZP 382..618 CDD:214579 11/53 (21%)
CG42326NP_001286200.1 PAN_AP 44..>104 CDD:214680
PHA03247 <224..416 CDD:223021
PAN_AP_HGF 468..560 CDD:238532
PAN_AP_HGF 870..953 CDD:238532 15/85 (18%)
PAN_AP_HGF 984..1070 CDD:238532 26/89 (29%)
Blue background indicates that the domain is not in the aligned region.

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