DRSC/TRiP Functional Genomics Resources

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Protein Alignment nyo and cutl-6

DIOPT Version :10

Sequence 1:NP_651871.2 Gene:nyo / 43716 FlyBaseID:FBgn0039852 Length:805 Species:Drosophila melanogaster
Sequence 2:NP_492000.2 Gene:cutl-6 / 189075 WormBaseID:WBGene00012165 Length:374 Species:Caenorhabditis elegans


Alignment Length:311 Identity:72/311 - (23%)
Similarity:132/311 - (42%) Gaps:54/311 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   383 CRSGEMITKIRTSKLFDGKVYAKG--APKSC----AVNVNNSLEFDFRMGYNDLECNVR--QSAY 439
            |...::...|.|||.|.|.::.||  ..|||    |.|..||  :...:|    :|.::  :||.
 Worm    39 CAENDLALDIVTSKPFRGNIFVKGRAKDKSCRQSYANNGTNS--YSLPLG----KCGMQRLRSAN 97

  Fly   440 GR---YMNDIVIQHHDM-IVTSSDLGLAVSCQYDLTNKTVLNDVDLGVTGEIESSLSEEITIDSP 500
            .|   :|..:::..|.. .:|.:|....|.|.|...::.|..::|:.:....|  ||:.:.:...
 Worm    98 PRGVNFMVTVIVSFHPAGFITKNDRAFHVKCFYMEPDEIVTQNIDVSMIPTTE--LSDSMVMPKC 160

  Fly   501 NVIMKITSRDGSDMKRM--AEVGDPLALRFEIVEPNSPYE--IFVRELVAMDGSDSAEITLIDAN 561
            ...::   |||.:...:  |.|||   :.|.:.| .:|.:  :.|::....|| |..:..::|.:
 Worm   161 EYSVR---RDGPNGPTLTYANVGD---IVFHVWE-CTPADMGMLVKKCFVTDG-DGEDHAVVDFD 217

  Fly   562 GCPTDQYIMGTIQKLAQNRKVLLSQFDAFKFPSSEVVQFRALVTPCIPRCEPVICDSEDGASGE- 625
            ||.||.:::..:...|...:...|. ..||:..|..:.|         .|:..:|..:.|...| 
 Worm   218 GCATDPFLLSELSYDASLMRAHASS-QVFKYADSNQLYF---------TCQIRLCQKQMGMCQEV 272

  Fly   626 ------LKSLVSY----GRKKRSVLNGTDGAEFLISTRHRRDVGPVDDNIL 666
                  :|.|:|.    |.:.:...:.:| .|..::|.....:.|.|..:|
 Worm   273 TPPNCGVKKLLSEASGDGNRTKREADRSD-YEIDVATSELLVLDPADRGLL 322

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nyoNP_651871.2 PAN_1 121..198 CDD:459635
PAN_AP_HGF 208..286 CDD:238532
PAN_1 295..358 CDD:459635
ZP 382..618 CDD:214579 60/250 (24%)
cutl-6NP_492000.2 ZP 38..280 CDD:214579 62/266 (23%)
Blue background indicates that the domain is not in the aligned region.

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