DRSC/TRiP Functional Genomics Resources

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Protein Alignment nyo and C30H6.5

DIOPT Version :10

Sequence 1:NP_651871.2 Gene:nyo / 43716 FlyBaseID:FBgn0039852 Length:805 Species:Drosophila melanogaster
Sequence 2:NP_001255948.1 Gene:C30H6.5 / 183068 WormBaseID:WBGene00007823 Length:530 Species:Caenorhabditis elegans


Alignment Length:580 Identity:117/580 - (20%)
Similarity:186/580 - (32%) Gaps:197/580 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   271 GGSVEPYDGAD-----YLENNCAEEPSKLCEFKRISGKILKTVDSVYQDINTIDECRDLCLNSP- 329
            ||:...|...|     .|.:|         ||...||.:|      .::|:.::||...|:.:| 
 Worm    66 GGTTALYRSKDVFSCFVLHSN---------EFLEKSGNVL------IENIDDVNECLRKCIQAPM 115

  Fly   330 ---YRCHSYDYNDTGDMVCRLSHHSRATLTDVMDPYLDVPEAATYELSACYNVSIECRSGEMITK 391
               .:|.:..|| .....|.||.::|...|......|.:.   .|| :.|.:...|.....:.|:
 Worm   116 NHKIKCKTVMYN-VNTQNCVLSKYARHERTVKKSKGLQID---LYE-NRCASTENETVRLAVFTE 175

  Fly   392 --------IRTSKLFDGKVYAKGAPKSCAVNVNNSLEFDFRMGYNDLECNVRQSAYGRYMNDIVI 448
                    :|||.:  |.|.....|     |:|                       |...|..:.
 Worm   176 QTRTTSAPVRTSIV--GNVIMAPVP-----NLN-----------------------GTTTNAPIS 210

  Fly   449 QHHDMIVTSSDLGL--AVSCQYDLTNKTVLNDVDLGVTGEIESSLSEEITIDSPNVIMKITSRDG 511
            .....|.|:::|..  ||. ||.|..|          .|.:  ..|:.:..|.|:          
 Worm   211 TTQQAIPTTNELRRVHAVK-QYPLDPK----------NGNV--IFSKTVYADQPS---------- 252

  Fly   512 SDMKRMAEVGDPLALRFEIVEPNSPYEIFV--RELVAMDGSDSAEITLIDANGCPTDQYIMGTIQ 574
                      .||..|| :...|...:||:  |.||     ||....:..|......|..:|::.
 Worm   253 ----------PPLPQRF-VDRRNRNAKIFLSPRPLV-----DSTSSVVAAAQQQVQLQSDVGSLT 301

  Fly   575 KLAQNRK---VLLSQFDA-------------FKFPSSEV--VQFRALVTPCIPRCEPVICDSEDG 621
            |..:.|.   |:|.....             .||..|.:  |.....:..|....:...|.|.: 
 Worm   302 KERRQRSERPVVLENLAVPAGCFIKTPNRILHKFEESRIGGVTLETCMRQCAQSLQNFYCASIN- 365

  Fly   622 ASGELKSLVSYGRKKRSVLNG----TDGAEFLISTRHRRDVGPVDDNILLMQSIQITDKFGF--- 679
                    .|:| .|..:|||    .:|.:.|:.:|                      :|.:   
 Worm   366 --------YSFG-LKICILNGGNLHLNGGDTLVGSR----------------------EFDYFEN 399

  Fly   680 --QPEDGTTTHGN--DSGPHEKAYAGVAQDKL---TCLNGYGLIMAGALFLLAQLSIFGIWKTVQ 737
              ||...|||..:  .||..::.|      :|   :..|.:...:.|.|..|........|..::
 Worm   400 TCQPRSTTTTESSIGGSGTKKECY------RLYNNSIYNSFDATIVGGLQDLESCESECSWSHIR 458

  Fly   738 RR----------TSKERYLYQH-------EPTPTITYGAPTMLYGPPPNSSAGSSASGTS 780
            ||          |::...|:..       :|:....:.|.|..|....:||..||:|.:|
 Worm   459 RREKCLGVNWIPTTRGCMLFHKQIDFNVLQPSFKAQFLANTCTYTTDQSSSRSSSSSSSS 518

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nyoNP_651871.2 PAN_1 121..198 CDD:459635
PAN_AP_HGF 208..286 CDD:238532 5/19 (26%)
PAN_1 295..358 CDD:459635 18/66 (27%)
ZP 382..618 CDD:214579 50/265 (19%)
C30H6.5NP_001255948.1 PAN_AP_HGF 80..159 CDD:238532 23/98 (23%)
PAN_AP_HGF 323..400 CDD:238532 17/108 (16%)
PAN_AP 422..488 CDD:214680 11/71 (15%)
Blue background indicates that the domain is not in the aligned region.

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