DRSC/TRiP Functional Genomics Resources

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Protein Alignment nyo and cutl-18

DIOPT Version :10

Sequence 1:NP_651871.2 Gene:nyo / 43716 FlyBaseID:FBgn0039852 Length:805 Species:Drosophila melanogaster
Sequence 2:NP_505875.2 Gene:cutl-18 / 179565 WormBaseID:WBGene00009830 Length:801 Species:Caenorhabditis elegans


Alignment Length:756 Identity:140/756 - (18%)
Similarity:233/756 - (30%) Gaps:290/756 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly   139 LPGTLMLTDCLEACQSNESCSAVNYETGLCVLFKTTADKLP--GSLSRSQFPVFTIYAQKSCLGV 201
            ||.:  .|.|..:|... :|:.|.::...|::.    ||..  |.:....      |.:|.|:..
 Worm    44 LPAS--ATACFNSCALG-NCTGVLFQGDKCIVI----DKSNYFGRIEERN------YIEKKCVKK 95

  Fly   202 RP---CSKAWCIDRVQGYRLPEHVKSSQTVL---SRRDCLELCLGETEFTCRSANYYRHSGLCEL 260
            .|   ..|.| .||:.       |..||:||   ::.:||.||..|..|.|.||.:||.|..|.|
 Worm    96 APHRLLVKEW-DDRIL-------VDKSQSVLKAETKLECLSLCAQEKRFPCLSAMFYRDSKDCLL 152

  Fly   261 ----SDMDRITLSAGGSVEPY---------------------------------DGADYLENNCA 288
                |...::.:..||....|                                 :|:|.| ..|.
 Worm   153 NSASSSSAKLKMDTGGFKVSYMELHGLKEAVHCLNAFKMVAFDAIEIRGESRIFNGSDGL-GKCM 216

  Fly   289 EEPSKLCE--------------FKRISGKILKTVDSVYQ-------------------------- 313
            |: .|.|:              :...||::|..|:..||                          
 Worm   217 EK-CKDCDVVMYNEGFSECYSVWNDPSGQLLDFVNDEYQILTNACSYQKKTCNSRNSLYISYSNP 280

  Fly   314 ------------------------------------------------DINTID----------- 319
                                                            |:|.:.           
 Worm   281 DESLKSECLEKCTMSEECRFAYQSKDMNNCLISRRRMALPMLAQKICADVNDLSDGSAILFDELG 345

  Fly   320 -----------------ECRDLCLNSPYR-CHSYDYNDTGDMVCRLSHHSRATLTD--------- 357
                             :|..||...|.| |.|..|..:.|  |.|  |..|..||         
 Worm   346 GCKNENGQLISKDLELHQCMQLCATHPTRSCESISYTKSRD--CYL--HDGAVETDNENTNCSVF 406

  Fly   358 ----------------------VMDPYLDVPEAATY-----------ELSACY------------ 377
                                  |..|:    :|.|:           |....|            
 Worm   407 TLNVITFEQELKPTTIAPGDSKVKKPH----KAKTFSTGNKKDQKKVEERKLYVKKSSKLGSSPL 467

  Fly   378 --NVSIECRSGEMITKIR-----TSKLFDGKVYAKGAPKSCAVNVNNSLEFDFRMGYNDLECNVR 435
              .:|.:|..|.:..|:.     ...|..|::|.:....:|:..:....|...::.:||..|..:
 Worm   468 DVKISTQCTFGFISVKVSPGNPDNHNLVGGEIYVRNGHSNCSKTIGTDGEAILKIRHNDTTCITK 532

  Fly   436 QSAYGRYMNDIVIQHHDM-------IVTSSDLGLAVSCQYDLTNKTVLNDVDLGVTGEIESSLSE 493
            .   |.....:|:...::       ::|..|....|.|.|  :|:.  |.|.:..|..:.::...
 Worm   533 N---GDIYETVVVVTQNVESVGNATVITIDDQLFKVRCDY--SNQK--NAVAVAKTMNLRTTQFN 590

  Fly   494 EITI-DSPNV---IMKITSRDGSDMKRMAEVGDPLALRFEIVEPNSPYEIFVRELVAMDGSDSAE 554
            ::.| ...||   .|::..:......|..::|..|.|.|.:....|...:||::..|.|.:...:
 Worm   591 KLDIYGKVNVKPMSMELRGKREIIKARTVKLGQSLDLVFTVDNSTSARHVFVKKCTAYDQNGDEK 655

  Fly   555 ITLIDANGCPTD---QYIMGTIQKLAQNRKVLLSQFDAFKFPSSEVVQFRALVTPCIPRCEPVIC 616
            |.|| .|||.|.   :|::.  .::.:.....:..|.||:|...|.|:....|..| .:|:...|
 Worm   656 IILI-KNGCATQHAKEYVLR--DEIKETATGFVLPFRAFRFKQGEAVKIECEVKYC-EKCKKANC 716

  Fly   617 DSEDGASGELKSLVSYGRKKRSVLNGTDG-----AEFLIST 652
            .|.:      :...::...:.:.|.|.:.     ||.|:.|
 Worm   717 PSRN------RRFTTFDESEDTTLTGNEDTEKVHAELLVQT 751

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nyoNP_651871.2 PAN_1 121..198 CDD:459635 13/60 (22%)
PAN_AP_HGF 208..286 CDD:238532 29/117 (25%)
PAN_1 295..358 CDD:459635 24/210 (11%)
ZP 382..618 CDD:214579 54/254 (21%)
cutl-18NP_505875.2 PAN_AP_HGF 105..177 CDD:238532 26/79 (33%)
PAN_AP 187..258 CDD:214680 13/72 (18%)
ZP 474..719 CDD:214579 54/255 (21%)

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