DRSC/TRiP Functional Genomics Resources

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Protein Alignment nyo and pana-1

DIOPT Version :10

Sequence 1:NP_651871.2 Gene:nyo / 43716 FlyBaseID:FBgn0039852 Length:805 Species:Drosophila melanogaster
Sequence 2:NP_505128.1 Gene:pana-1 / 179207 WormBaseID:WBGene00015857 Length:398 Species:Caenorhabditis elegans


Alignment Length:210 Identity:53/210 - (25%)
Similarity:87/210 - (41%) Gaps:36/210 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   209 CIDRVQGYRLPEHVKSSQTVLSRRDCLELCLGETEFTCRSANYYRHSGLCEL---SDMDRITLSA 270
            |.|:.....|......|...||...|...||.....||:|..|.:.:..|:|   |..|..|:. 
 Worm    21 CFDKSPNKSLFARPLISLRNLSLDKCFSACLEMPRETCKSVTYTKKTMNCQLNGKSKQDVKTVK- 84

  Fly   271 GGSVEPYDGADYLENNCAEEPSKLCE----------FKRISGKIL-KTVDSVYQDINTIDECRDL 324
                .|.  :|:....|.::||....          |....||:| ..||.:.:|:.|:::|:..
 Worm    85 ----NPM--SDFYHRTCFDKPSVAIRRDTVASESGCFTSTPGKVLIGIVDQLVRDVATVNDCQAQ 143

  Fly   325 CLNSPYR----CHSYDYNDTGDMVCRLSHHSRATLTDVMDPYLDVPEAATYELSACYNVSIECRS 385
            |.||..:    |.|..|.:. |..|.|:..|:|   |:.|.::| .:.:.|..::|.:.|     
 Worm   144 CSNSQTKYDITCKSAMYYEK-DKECILASQSKA---DIPDLFID-DDKSLYLENSCLDKS----- 198

  Fly   386 GEMITKIRTSKLFDG 400
             :....::||.:|.|
 Worm   199 -DKSVVVKTSDIFKG 212

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nyoNP_651871.2 PAN_1 121..198 CDD:459635
PAN_AP_HGF 208..286 CDD:238532 20/79 (25%)
PAN_1 295..358 CDD:459635 20/77 (26%)
ZP 382..618 CDD:214579 4/19 (21%)
pana-1NP_505128.1 PAN_AP_HGF 21..94 CDD:238532 20/79 (25%)
PAN_AP_HGF 110..193 CDD:238532 24/87 (28%)
Blue background indicates that the domain is not in the aligned region.

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