DRSC/TRiP Functional Genomics Resources

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Protein Alignment nyo and let-653

DIOPT Version :10

Sequence 1:NP_651871.2 Gene:nyo / 43716 FlyBaseID:FBgn0039852 Length:805 Species:Drosophila melanogaster
Sequence 2:NP_001021336.2 Gene:let-653 / 178120 WormBaseID:WBGene00002827 Length:812 Species:Caenorhabditis elegans


Alignment Length:439 Identity:89/439 - (20%)
Similarity:139/439 - (31%) Gaps:157/439 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   143 LMLTDCLEACQSNE---------SCSAVNYETG------LCVLFKTTADKLPGSLSRSQFPV--- 189
            |.|..|..||...|         .|:|||::..      ||.:|:      |..|......|   
 Worm    48 LSLKGCQSACSLGEDPVSPGKQLECAAVNHQASPDGFSHLCAVFQ------PHQLQNVDGYVEAD 106

  Fly   190 --FTIYAQKSCL-GVRPCSKAWCI----DRVQGYRLPEHVKSSQTVLSRRDCLELCLGETEFTCR 247
              ||.| .|.|| ..|.||..:..    ||   |...:.|....|..:..:||..||.|..|.||
 Worm   107 DRFTFY-WKYCLPSTRKCSGEYAFTYLSDR---YMDQKSVIKWTTKANLEECLSDCLDEKSFECR 167

  Fly   248 SANYYRHSGLCELSDMDRITLSAGGSV--EPYDGADYLENNCAEEPSKLCEFKRISGKILKTVDS 310
            |.::.|..|.|.:|...:|:......:  .|....||.||||                       
 Worm   168 SISFNRTDGGCHMSKDSQISRPEAIRLNNNPNYRIDYYENNC----------------------- 209

  Fly   311 VYQDINTIDECRDLCLNSPYRCHSYDYNDTGDMVCRLSHHSRATLTDVMDPYLDVPEAATYELSA 375
                                                                        |.||.
 Worm   210 ------------------------------------------------------------YNLSE 214

  Fly   376 CYNVSIECRSGEMITKIRTSKLFDGKVYAKGAPKSCAVNVNNSLEFDFRMGYNDLECNVRQSAYG 440
            .:....|||...:...:::...:.|.:|......:|......:.|||....|..:..|...|.  
 Worm   215 SFTFKHECRDNGISVSVKSRLPYTGAIYGLYDFFTCRTEPKEATEFDHFFPYQTVSKNCSDSI-- 277

  Fly   441 RYM-NDIVIQHHDMIVTSSDLGLAVSCQYDLTNKTVLNDVDLGVTGEIESSLSEEITIDSPNVIM 504
            :|. |::|::    :|.|:|   .:...|.:|                    .|::|..:...|.
 Worm   278 KYKGNEMVLE----VVLSTD---GIEPLYFIT--------------------PEDLTYQAKCPIS 315

  Fly   505 KITSRDGSDMKRMAEVGDPLALRFEIVEPNSPYEIFVRELVAMDGSDSA 553
            .:.::|.::.|..|.:.:    |.:.:|. |.:.:|  ||::..|.|.|
 Worm   316 GVKAKDPANTKSSAHLDN----RNKAMEA-SAHALF--ELLSKTGDDEA 357

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nyoNP_651871.2 PAN_1 121..198 CDD:459635 20/74 (27%)
PAN_AP_HGF 208..286 CDD:238532 23/83 (28%)
PAN_1 295..358 CDD:459635 0/62 (0%)
ZP 382..618 CDD:214579 35/173 (20%)
let-653NP_001021336.2 PAN_AP_HGF 124..208 CDD:238532 24/86 (28%)
ZP <606..727 CDD:214579
Blue background indicates that the domain is not in the aligned region.

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