DRSC/TRiP Functional Genomics Resources

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Protein Alignment nyo and cut-3

DIOPT Version :10

Sequence 1:NP_651871.2 Gene:nyo / 43716 FlyBaseID:FBgn0039852 Length:805 Species:Drosophila melanogaster
Sequence 2:NP_495780.1 Gene:cut-3 / 174347 WormBaseID:WBGene00009041 Length:389 Species:Caenorhabditis elegans


Alignment Length:401 Identity:77/401 - (19%)
Similarity:146/401 - (36%) Gaps:98/401 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   381 IECRSGEMITKIRTSKLFDGKVYAKGA--PKSCAVNVNN------SLEFDFRMGYNDLECNVRQS 437
            :||....:.....|...|:|.||.||.  .:.|..:...      .|.||        .|||.::
 Worm    32 VECGPTSITVNFNTRNAFEGHVYVKGLFDQQECRNDEGGRQVAGIELPFD--------TCNVART 88

  Fly   438 AYGRYMN--------DIVIQHHDMIVTSSDLGLAVSCQYDLTNKTVLNDVDLGVTGEIESSLSEE 494
               |.:|        .:|:..|...||..|....|.|.|...:|||...:::   .::.::...:
 Worm    89 ---RSLNPKGVFVTTTVVVSFHPQFVTKVDRAYRVQCFYMEADKTVSTQIEV---SDLTTAFQTQ 147

  Fly   495 ITIDSPNVIMKITSRDGSDMKRMAEVGDPLALRFEIV------------EPNSPYEIFVRELVAM 547
            :.   |..|.|....:|      ...|:|  ::|..:            |....:...|......
 Worm   148 VV---PMPICKYEILNG------GPTGEP--VQFATIGQQVYHKWTCDSETVDTFCAVVHSCTVD 201

  Fly   548 DGSDSAEITLIDANGCPTDQYIMGTIQKLAQNRKVLLSQFDA--FKFPSSEVVQFRALVTPCI-- 608
            ||:... :.::|.|||..|::::..::....    |::..:|  :|:.....:.::..::..:  
 Worm   202 DGNGDT-VQILDENGCALDKFLLNNLEYPTD----LMAGQEAHVYKYADRSQLFYQCQISITVKE 261

  Fly   609 --PRCEPVICDSEDGASGELKSLVSYGRKKRSVLNGTDGAEFLISTRHRRDVGPVDDNILLMQSI 671
              ..|....|....|          :|..|::  |.|  |:|....:.|.  .||.:|||.:::.
 Worm   262 PNEECARPTCSEPQG----------FGAVKQA--NQT--AQFFRVLKKRS--APVMENILDVRAE 310

  Fly   672 QITDKFGFQPEDGTTTHGNDSGPHEKAYAGVAQDKL--------TCLNGYGL-IMAGALFLLAQL 727
            ..|.:         ...||......:|.|.||..::        .|::.:.: ::...|.|...:
 Worm   311 LTTLE---------VLEGNLPSSLTQAQALVASREIGEDSFRQELCISSFHISVVTVFLGLTVFV 366

  Fly   728 SIFGIWKTVQR 738
            :||..:..|.|
 Worm   367 AIFITYMIVSR 377

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nyoNP_651871.2 PAN_1 121..198 CDD:459635
PAN_AP_HGF 208..286 CDD:238532
PAN_1 295..358 CDD:459635
ZP 382..618 CDD:214579 50/269 (19%)
cut-3NP_495780.1 ZP 33..272 CDD:214579 49/268 (18%)
Blue background indicates that the domain is not in the aligned region.

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