DRSC/TRiP Functional Genomics Resources

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Protein Alignment mey and F52C9.5

DIOPT Version :9

Sequence 1:NP_001287622.1 Gene:mey / 43715 FlyBaseID:FBgn0039851 Length:774 Species:Drosophila melanogaster
Sequence 2:NP_001367876.1 Gene:F52C9.5 / 186097 WormBaseID:WBGene00018675 Length:645 Species:Caenorhabditis elegans


Alignment Length:430 Identity:97/430 - (22%)
Similarity:144/430 - (33%) Gaps:127/430 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    75 LSVEPAEAIAASPPGSIGDSSGASAAAPVPPAAASAAAVAETKADDLD----------------P 123
            ||:...|:.:::|.....||      .|.||.:|...|:| |..|..|                |
 Worm   219 LSMINGESSSSAPSSEDEDS------PPSPPPSAPIVALA-TNTDKRDEHEEMTETIEDITVASP 276

  Fly   124 TPMATPSGSSSVDEDCEPDMIGFELITGYVLSAPSKQLETLPGTLMLTDCLEACQANE------S 182
            :..:.|.|..|.....|    ||||.:       ....|.:.|.  :.:|.:||..|:      .
 Worm   277 SSDSCPRGKQSTFLRTE----GFELFS-------HDDQELVVGD--VAECAKACIENKINGVALK 328

  Fly   183 CSAVNY--ETGLCVMFRSTADQLP---GSLSRSQYPVFTVYAQKSCFG---VRPCSKAWCIDRVQ 239
            |.:.::  .|..|. |.|.| .:|   |.|.:.:   ...|.:|.|..   |..|...:.....|
 Worm   329 CKSFDFLSSTSTCA-FTSEA-AVPVGNGQLKQRE---DASYHEKICVSKSFVESCPSTFFSRHPQ 388

  Fly   240 ----GYRLPERAKASQSVATRRDCIELCLGETE---FTCRSANYYAHSGL--CELSDMDRIT--- 292
                |:     |::.....:...|.:.||...:   |.|.|..||.....  |.|:..:|.|   
 Worm   389 MILVGF-----AESVSDSPSFEHCFDTCLNSYQLFGFNCTSGMYYFEENQLNCILNSENRNTQRE 448

  Fly   293 LSDEANIAAYDGADYLENNCAEEPSKLCEFKRVAGRILKTVDSV--------HQNV-------QT 342
            |..|.|.   |..||.|..|....||..:.|....|..:| |::        |::|       ::
 Worm   449 LFTEENT---DIVDYFEVECTTPRSKQSKRKMAGVRNFET-DAIGADKMVTDHEDVEEDGSKWES 509

  Fly   343 LDECRDLCLTAPFRCHSYDYNE------------------------TGELVCRLSHHSRATLTDL 383
            ..||:|...|....|.:::..|                        .|||............||.
 Worm   510 WSECQDGKQTRRKICANFNQIEDCAEEVRDCVDEIDSTDMRMSIKRAGELENNDHEQIEDNNTDA 574

  Fly   384 SE-PYLSIEEAATYEQ-----------SACYNVSIDCRSG 411
            || |..:.||.|..:|           :.|..|.:.|..|
 Worm   575 SEDPVPTKEEIAEVKQKIRRTGFKCPLNECCRVFLSCSYG 614

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
meyNP_001287622.1 PAN_1 146..223 CDD:278453 20/87 (23%)
PAN_AP_HGF 233..311 CDD:238532 22/89 (25%)
PAN_AP_HGF 319..>380 CDD:238532 15/99 (15%)
ZP 408..642 CDD:214579 2/4 (50%)
F52C9.5NP_001367876.1 PAN_AP 132..213 CDD:214680
PAN_1 287..369 CDD:394981 23/99 (23%)
PAN_AP_HGF 383..462 CDD:238532 21/86 (24%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160157388
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR47327
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.030

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