DRSC/TRiP Functional Genomics Resources

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Protein Alignment mey and noah-1

DIOPT Version :9

Sequence 1:NP_001287622.1 Gene:mey / 43715 FlyBaseID:FBgn0039851 Length:774 Species:Drosophila melanogaster
Sequence 2:NP_001250022.1 Gene:noah-1 / 172261 WormBaseID:WBGene00016422 Length:1052 Species:Caenorhabditis elegans


Alignment Length:738 Identity:166/738 - (22%)
Similarity:276/738 - (37%) Gaps:203/738 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   127 ATPSGSSSVDEDCEPDMIGFELITGYVLSAPSKQLETLPGTLMLTDCLEAC--QANESCSAVNYE 189
            |.|.|.|.:                :||.|.:.:        .:.:|:..|  .|.|.|.:.||:
 Worm   402 ALPEGESEL----------------HVLKASAAK--------GIKECVAKCFGLAPEKCRSFNYD 442

  Fly   190 --TGLCVMFRSTADQLPGSLSRSQYPVFTVYAQKSCFGV-RPCS--------KAWCIDRVQGYRL 243
              |..|.:.............|....::.::    |..| ..||        ..:...:.:|  :
 Worm   443 KKTKSCDLLYLDGHNTLQPQVRQGVDLYDLH----CLAVENDCSANKDDALFSRYLHTKQRG--I 501

  Fly   244 PERAKASQSVATRRDCIELCLGETEFTCRSANYYAHSGLCELSDMDRITLSDEANIAAYDGADYL 308
            |.:.   ..|.:...|:|:|.|..  ||..|||....|.|.|.|    .:.|:|.|..:  .|:.
 Worm   502 PAKV---YKVVSLNSCLEVCAGNP--TCAGANYNRRLGDCTLFD----AIDDDAEINEH--TDFY 555

  Fly   309 ENNC--------AEEPSKLCEFK-RVAGRILKTVDSVHQNVQTLDECRDLCLTAPFRCHSYDYNE 364
            :|.|        |...:.:.|.| ||:|.:::..||..|.:.|                    .:
 Worm   556 KNLCVTKEIDTGASAAANVPETKHRVSGTVVEGKDSKSQLLAT--------------------KK 600

  Fly   365 TGELVCRLSHHSRA--TLTDLSEPYLSIEEAATYEQSAC--YNVSIDCRSGEMITKIRTSKLFDG 425
            ..:...:.:.|.||  :...:..|   :|..|...|:.|  ..:.:...:||.         |.|
 Worm   601 VKKPTIKNTEHRRAPESTVPIGPP---VEVKAEAIQTICNYEGIKVQINNGEP---------FSG 653

  Fly   426 KVYAKGAPKSCAVNVNNS--------LEFDLKMRYNDL--------------------------- 455
            .::.|....:|.|.|.||        |..|..||...|                           
 Worm   654 VIFVKNKFDTCRVEVANSNAATLVLGLPKDFGMRPISLDNIDDNETGKNKTKKGEETPLKDEIEE 718

  Fly   456 -----------ECNVRQSAYGRYMNDIVIQHHDM----IVTSSDLGLAVSCQY-DLTNKTVVNNV 504
                       :|.:.....|.|.:.:|||.:::    :|||.|....|||.| .:....|....
 Worm   719 FRQKRQAAEFRDCGLVDLLNGTYKSTVVIQTNNLGIPGLVTSMDQLYEVSCDYSSMLGGRVQAGY 783

  Fly   505 DLGVTGEIESTLSE---EIIVDSPNVIMKITARDGSDMKRI-AEVGDPLALRFEIVDANSPYEIF 565
            ::.|||. |:.|.:   :|.:.:| |:|::...||::...: |::||.|.||:||:..:...:.|
 Worm   784 NMTVTGP-EANLIQPRGKIELGNP-VLMQLLNGDGTEQPLVQAKLGDILELRWEIMAMDDELDFF 846

  Fly   566 VRELVAMDGTDSA------EITLIDANGCPTDQYIMSAMQKL------ANNRKVLLSQFDAFKFP 618
            |:...|..|....      ::.||| .||||.    :..|||      ..:..|..::..||:|.
 Worm   847 VKNCHAEPGVAGGKAGAGEKLRLID-GGCPTP----AVAQKLIPGAIEIKSSAVKTTKMQAFRFD 906

  Fly   619 SSELVQFRALVTPCIPRCEPVICDNDENGELKSLLSYGRRKRSVLNGTDGVELAIKSERQKRDVS 683
            ||..::....|..|...||||.|  ...|.:|.  |:||:||.|.|..:      :.|..:..:.
 Worm   907 SSASIRVTCEVEICKGDCEPVEC--ALTGGVKK--SFGRKKREVSNNIE------EFETNRYLIP 961

  Fly   684 HQAAGDENILLVQSIQ-----ITDKFAFNGADAPGGSGSEAGGLDGLAK--LQLDLGTKSDTCIN 741
            .::....:|:::..:|     :.:..|.          |.|..||.|.:  .::.:..:...|:|
 Worm   962 RRSHATTSIVIIDPLQQVCTKVNEPVAM----------SRASTLDLLREDAHEVQMIEEGSICLN 1016

  Fly   742 GYG-FIIAGALFLLL--QLTVIA 761
            ... |.|.|.|.:|:  |..|||
 Worm  1017 SVTVFAIFGTLAVLILGQTVVIA 1039

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
meyNP_001287622.1 PAN_1 146..223 CDD:278453 13/80 (16%)
PAN_AP_HGF 233..311 CDD:238532 20/77 (26%)
PAN_AP_HGF 319..>380 CDD:238532 12/63 (19%)
ZP 408..642 CDD:214579 75/300 (25%)
noah-1NP_001250022.1 PAN_AP_HGF 107..189 CDD:238532
PAN_AP_HGF 201..282 CDD:238532
PAN_AP_HGF 295..379 CDD:238532
PAN_AP_HGF 391..473 CDD:238532 17/94 (18%)
PAN_APPLE 485..557 CDD:294081 20/84 (24%)
Zona_pellucida <818..920 CDD:278526 29/106 (27%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 78 1.000 Domainoid score I5679
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H119456
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0005301
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR47327
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
55.010

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