DRSC/TRiP Functional Genomics Resources

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Protein Alignment Loxl1 and loxl2a

DIOPT Version :10

Sequence 1:NP_524607.1 Gene:Loxl1 / 43712 FlyBaseID:FBgn0039848 Length:360 Species:Drosophila melanogaster
Sequence 2:NP_001092714.1 Gene:loxl2a / 565508 ZFINID:ZDB-GENE-070818-1 Length:737 Species:Danio rerio


Alignment Length:308 Identity:137/308 - (44%)
Similarity:178/308 - (57%) Gaps:13/308 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    50 EGRVEVSFDFGAS--WGTICSTSWSMREANVVCRQLGLGYASKASQGTEH--GDSRKYPWGMVGT 110
            ||||||..:...|  |||:||.:|.:.||.|||||||||:||.|.|.|.:  ||:......|.|.
Zfish   413 EGRVEVLAEKNGSLVWGTVCSENWGIIEAMVVCRQLGLGFASHAFQETWYWAGDANADNVVMSGV 477

  Fly   111 LCRGTERRLADCIRESHYPNLCNARNHNVSIAACVSHSADLEIGLVDIERTARLEAVPMSRLTCA 175
            .|.|||..|..|:....:.|.........:..:|...:.||.:....:|:|..||..||..|.||
Zfish   478 RCSGTEMSLPQCLHHGKHINCPKGGGRFAAGVSCSDTAPDLVLNAQLVEQTTYLEDRPMYALQCA 542

  Fly   176 MEEHCVSADAYEIRRTNPHAA-RILLRFSVKASNVGTADVSPYANYKEWVWHQCHRHYHSMNVFA 239
            :||:|:|:.|    |.|.|:: |.|||||.:..|||.:|..|...|..|.||:||||||||.||.
Zfish   543 LEENCLSSTA----RKNDHSSYRRLLRFSSQIHNVGQSDFRPKLGYHAWTWHECHRHYHSMEVFT 603

  Fly   240 TFDVYDLNYRKVAQGHKASFCLMDSECRPGVRQKYTCGN-TTQGISVGCADTYTDVLDCQWVDVT 303
            .:|:..||..|||:||||||||.|:.|..|:.::|.|.| ..|||:|||.|||...:||||:|||
Zfish   604 HYDLLSLNGTKVAEGHKASFCLEDTHCDEGISKRYHCANFGEQGITVGCWDTYRHDIDCQWIDVT 668

  Fly   304 RVPINRRYILRVALNPEYKLGEISFENNGAECLLDYTGVRQTTRIFNC 351
            .|... .||.:|.:||.|.:.|..:.||..:|...|.|.|..|  ::|
Zfish   669 DVKPG-DYIFQVVINPNYDVAESDYTNNVMKCKCRYDGYRIWT--YSC 713

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Loxl1NP_524607.1 SR 50..136 CDD:214555 40/89 (45%)
Lysyl_oxidase 149..351 CDD:460102 95/203 (47%)
loxl2aNP_001092714.1 SR 29..130 CDD:214555
SR 173..269 CDD:214555
SR 294..393 CDD:214555
SR 403..512 CDD:214555 40/98 (41%)
Lysyl-oxidase like. /evidence=ECO:0000250 516..718 96/205 (47%)
Lysyl_oxidase 516..713 CDD:460102 95/203 (47%)
Blue background indicates that the domain is not in the aligned region.

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