DRSC/TRiP Functional Genomics Resources

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Protein Alignment Loxl1 and si:ch211-51a6.2

DIOPT Version :10

Sequence 1:NP_524607.1 Gene:Loxl1 / 43712 FlyBaseID:FBgn0039848 Length:360 Species:Drosophila melanogaster
Sequence 2:XP_690649.3 Gene:si:ch211-51a6.2 / 562156 ZFINID:ZDB-GENE-090313-118 Length:832 Species:Danio rerio


Alignment Length:365 Identity:92/365 - (25%)
Similarity:130/365 - (35%) Gaps:87/365 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    50 EGRVEVSFDFGASWGTICSTSWSMREANVVCRQLGLGYASKASQGTEHGDSRKYPWGMVGTLCRG 114
            ||||||.::  ..|||||...|...:|.|||||||||...||......|.... |..:.|..|.|
Zfish   239 EGRVEVYYN--GRWGTICDDEWDDIDAEVVCRQLGLGGVPKAWTWAHFGQGNG-PIALDGVHCTG 300

  Fly   115 TERRLADCIRESHYPNLCNARNHNVSIAACVSHSADLEIGLV--DIERTARLEAVPMSRLTCAME 177
            .|..|.:|   .|.|...:..:|........:...|..:.||  |.....|||...      |.|
Zfish   301 NELSLEEC---PHAPWGRHNCDHMEDAGVSCNPFTDGVLRLVGADSPWEGRLEVYH------AGE 356

  Fly   178 EHCVSADAYEIRRTNPHAARILLRFSVKASNVGTADVSPYANYKE-------------------- 222
            ...|..|.:    |..||..:..:...:    |.|:|||...|.|                    
Zfish   357 WGTVCDDNW----TGRHAQVVCRQLGYR----GRAEVSPVGMYGEGTGLILLDEVTCEGGESSLL 413

  Fly   223 ------WVWHQCHRHYHSMNVFATFDVYDLNYRKVAQGHKASFCLMDSECRPGVRQKYTCGNTTQ 281
                  |..|.| .|...:.:....:..:....:||........|:|.|.|...|.:... |...
Zfish   414 DCAHSQWGQHDC-SHSEDVGIRCEREGQNNEIPEVAPVTGPLVRLVDGESRKEGRVEVFI-NAQW 476

  Fly   282 GISVGCADTYTDV---LDCQ---WVDVTRV-----------PINRRYILRVALNPEYKLGEISFE 329
            | || |.|.:.|:   :.|:   :|.|::.           ||:...:  ..:..|..|||.|..
Zfish   477 G-SV-CDDGWNDINAQVVCRQLGFVGVSKARSMAYFGEGQGPIHLDNV--KCVGTEVSLGECSAV 537

  Fly   330 NNGA-EC--------LLDYTGVRQTTRIFN-----CRRKP 355
            .:.| :|        :.||  |.:..:|.:     |..:|
Zfish   538 GSDAHDCRHSEDAGVICDY--VTEPVKISSFGKQECGMRP 575

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Loxl1NP_524607.1 SR 50..136 CDD:214555 34/85 (40%)
Lysyl_oxidase 149..351 CDD:460102 55/260 (21%)
si:ch211-51a6.2XP_690649.3 None

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