DRSC/TRiP Functional Genomics Resources

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Protein Alignment Loxl1 and loxl1

DIOPT Version :10

Sequence 1:NP_524607.1 Gene:Loxl1 / 43712 FlyBaseID:FBgn0039848 Length:360 Species:Drosophila melanogaster
Sequence 2:NP_001036790.1 Gene:loxl1 / 560115 ZFINID:ZDB-GENE-060503-693 Length:526 Species:Danio rerio


Alignment Length:248 Identity:93/248 - (37%)
Similarity:136/248 - (54%) Gaps:38/248 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   108 VGTLCRGTERRLADCIRESHYPNLCNARNHNVSIAACVSHSADLEIGLVDIERTARLEAVPMSRL 172
            ||::.|..:|.|.|.:.:.:|                             ::.:..::...|..|
Zfish   310 VGSVYRPQQRGLPDLVPDPNY-----------------------------VQASTYVQRAHMYSL 345

  Fly   173 TCAMEEHCVSADAYEIRRTNPHAARILLRFSVKASNVGTADVSPYANYKEWVWHQCHRHYHSMNV 237
            .||.||.|:::.||....|: ::.|:||||..:..|.||||..|......|.||.||:|||||:.
Zfish   346 RCAAEEKCLASSAYNAETTD-YSVRVLLRFPQRVKNQGTADFMPNRPRHTWEWHSCHQHYHSMDE 409

  Fly   238 FATFDVYDLNY-RKVAQGHKASFCLMDSECRPGVRQKYTCGNTTQGISVGCADTYTDVLDCQWVD 301
            |:.:|:.:::. ||||:||||||||.|:.|..|..::|.|...|||:|.||.|||...:||||:|
Zfish   410 FSHYDLLEVSSGRKVAEGHKASFCLEDTTCDFGHLKRYACTAHTQGLSPGCFDTYNADIDCQWID 474

  Fly   302 VTRV-PINRRYILRVALNPEYKLGEISFENNGAECLLDYTG-VRQTTRIFNCR 352
            :|.| |.|  |||::.:||:|.:.|..|.||...|.:.||| ..:||   ||:
Zfish   475 ITDVQPGN--YILKLQVNPKYLVLESDFTNNIVGCNIHYTGRYAKTT---NCK 522

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Loxl1NP_524607.1 SR 50..136 CDD:214555 7/27 (26%)
Lysyl_oxidase 149..351 CDD:460102 84/204 (41%)
loxl1NP_001036790.1 Lysyl_oxidase 322..521 CDD:460102 86/233 (37%)

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