DRSC/TRiP Functional Genomics Resources

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Protein Alignment Loxl1 and Loxl2

DIOPT Version :10

Sequence 1:NP_524607.1 Gene:Loxl1 / 43712 FlyBaseID:FBgn0039848 Length:360 Species:Drosophila melanogaster
Sequence 2:XP_038949076.1 Gene:Loxl2 / 290350 RGDID:1308435 Length:823 Species:Rattus norvegicus


Alignment Length:320 Identity:137/320 - (42%)
Similarity:179/320 - (55%) Gaps:15/320 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    39 KAALAGIQVLREGRVEVSFDFGAS--WGTICSTSWSMREANVVCRQLGLGYASKASQGT--EHGD 99
            |..|.|.:...||||||..:...|  ||.:|..:|.:.||.|||||||||:||.|.|.|  .||:
  Rat   484 KVRLNGGRNPYEGRVEVLTERNGSLVWGNVCGQNWGIVEAMVVCRQLGLGFASNAFQETWYWHGN 548

  Fly   100 SRKYPWGMVGTLCRGTERRLADCIRESHYPNLC--NARNHNVSIAACVSHSADLEIGLVDIERTA 162
            .......|.|..|.|||..||.|..:...  :|  ....:...: ||...:.||.:....:::||
  Rat   549 IFANKVIMSGVKCSGTELSLAHCRHDEEV--VCPEGGVQYGAGV-ACSETAPDLVLNAEIVQQTA 610

  Fly   163 RLEAVPMSRLTCAMEEHCVSADAYEIRRTNPHAARILLRFSVKASNVGTADVSPYANYKEWVWHQ 227
            .||..||:.|.|||||:|:||.|.....|..|  |.|||||.:..|.|.:|..|......|:||.
  Rat   611 YLEDRPMALLQCAMEENCLSASAVHTDPTRGH--RRLLRFSSQIHNNGQSDFRPKNGRHAWIWHD 673

  Fly   228 CHRHYHSMNVFATFDVYDLNYRKVAQGHKASFCLMDSECRPGVRQKYTCGN-TTQGISVGCADTY 291
            ||||||||.||..:|:..||..|||:||||||||.|:||...:::.|.|.| ..|||::||.|.|
  Rat   674 CHRHYHSMEVFTYYDLLSLNGTKVAEGHKASFCLEDTECEGDIQKSYECANFGEQGITMGCWDMY 738

  Fly   292 TDVLDCQWVDVTRVPINRRYILRVALNPEYKLGEISFENNGAECLLDYTGVRQTTRIFNC 351
            ...:||||:|:|.||.. .|:.:|.:||.|::.|..|.||..:|...|.|.|  ..::||
  Rat   739 RHDIDCQWIDITDVPPG-DYLFQVVINPNYEVPESDFSNNIMKCRSRYDGYR--IWMYNC 795

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Loxl1NP_524607.1 SR 50..136 CDD:214555 39/91 (43%)
Lysyl_oxidase 149..351 CDD:460102 91/202 (45%)
Loxl2XP_038949076.1 SR 73..174 CDD:214555
SR 216..316 CDD:214555
SR 348..475 CDD:214555
SR 485..593 CDD:214555 42/110 (38%)
Lysyl_oxidase 597..795 CDD:460102 91/202 (45%)
Blue background indicates that the domain is not in the aligned region.

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