DRSC/TRiP Functional Genomics Resources

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Protein Alignment Loxl1 and SSC4D

DIOPT Version :10

Sequence 1:NP_524607.1 Gene:Loxl1 / 43712 FlyBaseID:FBgn0039848 Length:360 Species:Drosophila melanogaster
Sequence 2:XP_024302432.1 Gene:SSC4D / 136853 HGNCID:14461 Length:604 Species:Homo sapiens


Alignment Length:104 Identity:39/104 - (37%)
Similarity:48/104 - (46%) Gaps:16/104 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    50 EGRVEVSFDFGASWGTICSTSWSMREANVVCRQLGLGYASKASQGTEHGDSRKYPWGMVGTLCRG 114
            |||||:.  .|..|||:|..:|.:|.|.|:|||||.|.| .|:.|..|....:.|..:....|||
Human   512 EGRVELY--LGQRWGTVCDDAWDLRAAGVLCRQLGCGQA-LAAPGEAHFGPGRGPILLDNVKCRG 573

  Fly   115 TERRLADCIRESHYPNLCNARNHNVSIAACVSHSADLEI 153
            .|..|..|   ||    .....||     | .||.|..:
Human   574 EESALLLC---SH----IRWDAHN-----C-DHSEDASV 599

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Loxl1NP_524607.1 SR 50..136 CDD:214555 33/85 (39%)
Lysyl_oxidase 149..351 CDD:460102 1/5 (20%)
SSC4DXP_024302432.1 SR 87..186 CDD:214555
SR 218..317 CDD:214555
SR 373..472 CDD:214555
SR 502..602 CDD:214555 39/104 (38%)
Blue background indicates that the domain is not in the aligned region.

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