DRSC/TRiP Functional Genomics Resources

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Protein Alignment Loxl1 and LOC110440111

DIOPT Version :9

Sequence 1:NP_524607.1 Gene:Loxl1 / 43712 FlyBaseID:FBgn0039848 Length:360 Species:Drosophila melanogaster
Sequence 2:XP_021335598.1 Gene:LOC110440111 / 110440111 -ID:- Length:874 Species:Danio rerio


Alignment Length:348 Identity:142/348 - (40%)
Similarity:193/348 - (55%) Gaps:40/348 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 NVQNNYRNMMVRLATNKAALAGIQVLREGRVEVSFDFGAS--WGTICSTSWSMREANVVCRQLGL 85
            ||.|...:..||||..:.:       .||||||..:.|..  ||::||.:|::.||.|||||||.
Zfish   523 NVPNTGLSSTVRLAGGRES-------AEGRVEVLMEVGGQQRWGSVCSENWNINEAMVVCRQLGF 580

  Fly    86 GYASKASQGTEHGDSRKYPWG---------MVGTLCRGTERRLADCIRES--HYPNLCNARNHNV 139
            |:||:|.|.|       :.|.         :.||.|.|:|..:..|.|.:  :.|....||...|
Zfish   581 GFASRAHQET-------WFWPSSSGSEEVLLSGTHCVGSELSVQQCRRNTQVYCPRGGGARAAGV 638

  Fly   140 SIAACVSHSADLEIGLVDIERTARLEAVPMSRLTCAMEEHCVSADAYEI----RRTNPHAARILL 200
            :   ||..:.||.:....::.:|.:|..|:..||||.||:|:|:.|..|    |.|..:..|.||
Zfish   639 T---CVDVAPDLVVDAQLVQESAYVEDRPLHLLTCAHEENCLSSSAARIDWRNRHTLAYTHRRLL 700

  Fly   201 RFSVKASNVGTADVSPYANYKEWVWHQCHRHYHSMNVFATFDVYDLNYRKVAQGHKASFCLMDSE 265
            |||.:..|:|.||..|.|..:.|.||||||||||:.||..:|:..||..:||:||||||||.|:.
Zfish   701 RFSSRIMNLGRADFRPRATRESWTWHQCHRHYHSIEVFTHYDLLTLNGTRVAEGHKASFCLEDTY 765

  Fly   266 CRPGVRQKYTCGNT-TQGISVGCADTYTDVLDCQWVDVTRV-PINRRYILRVALNPEYKLGEISF 328
            |..|:.::|.|.|. .|||:|||.|||...:||||||:|.| |.|  ||.:|.:||...:.|..|
Zfish   766 CPEGLTKRYACYNMGDQGITVGCWDTYRHDIDCQWVDITDVRPGN--YIFQVEVNPSLDMAESDF 828

  Fly   329 ENNGAECLLDYTGVRQTTRIFNC 351
            :||...|...|.|.|  ..:::|
Zfish   829 QNNVMRCRCRYDGGR--VYLYSC 849

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Loxl1NP_524607.1 SRCR 50..137 CDD:278931 38/99 (38%)
SR 50..136 CDD:214555 37/98 (38%)
Lysyl_oxidase 149..343 CDD:279521 92/199 (46%)
LOC110440111XP_021335598.1 SR 23..123 CDD:214555
SRCR 296..403 CDD:306915
SR 423..523 CDD:214555 142/348 (41%)
SR 533..640 CDD:214555 43/123 (35%)
Lysyl_oxidase 645..850 CDD:307371 94/209 (45%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D376277at33208
OrthoFinder 1 1.000 - - FOG0000389
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.920

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