DRSC/TRiP Functional Genomics Resources

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Protein Alignment Loxl1 and LOC101733428

DIOPT Version :9

Sequence 1:NP_524607.1 Gene:Loxl1 / 43712 FlyBaseID:FBgn0039848 Length:360 Species:Drosophila melanogaster
Sequence 2:XP_031746768.1 Gene:LOC101733428 / 101733428 -ID:- Length:3046 Species:Xenopus tropicalis


Alignment Length:190 Identity:54/190 - (28%)
Similarity:74/190 - (38%) Gaps:65/190 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    50 EGRVEVSFDFGASWGTICSTSWSMREANVVCRQLGLGYASKAS---QGTEHGDSRKYPWGMVGTL 111
            |||:||.. || .|||:||.:|...||.|||||||...:.:.|   |.|..|......| .....
 Frog  1126 EGRLEVKI-FG-QWGTVCSANWGYNEARVVCRQLGCLPSEEDSHFIQPTFFGPGSSTIW-FQSVS 1187

  Fly   112 CRGTERRLADCIRESHYPNLCNARNHNVSIAACVSHSADLEIGLVDIERTARLEAVPMSRLTCA- 175
            |.|.|:.|.|||.|...|.:|:             ||||  :|::                 || 
 Frog  1188 CSGNEKALGDCITEPWNPGVCD-------------HSAD--VGVI-----------------CAG 1220

  Fly   176 -MEEHCVSADAYEIRRTNPHAARILLRFSVKASNVGTADVSPYANY-----KEWVWHQCH 229
             .||..:||.::|..                    |..:|..:..:     :||.|.:.:
 Frog  1221 EPEELRLSAGSHECE--------------------GRVEVKHHGEWGTVCSREWDWSEAN 1260

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Loxl1NP_524607.1 SRCR 50..137 CDD:278931 37/89 (42%)
SR 50..136 CDD:214555 37/88 (42%)
Lysyl_oxidase 149..343 CDD:279521 15/88 (17%)
LOC101733428XP_031746768.1 SRCR <2..36 CDD:395421
SR 42..139 CDD:214555
SR 146..249 CDD:214555
SR 255..352 CDD:214555
SR 359..460 CDD:214555
SR 467..568 CDD:214555
SR 574..676 CDD:214555
SR 682..785 CDD:214555
SR 791..892 CDD:214555
SR 899..1001 CDD:214555
SR 1008..1109 CDD:214555
SR 1116..1218 CDD:214555 42/126 (33%)
SR 1225..1326 CDD:214555 8/56 (14%)
SR 1332..1436 CDD:214555
SR 1443..1543 CDD:214555
SR 1609..1708 CDD:214555
SR 1716..1813 CDD:214555
SR 1820..1918 CDD:214555
SR 1924..2026 CDD:214555
SR 2032..2134 CDD:214555
SR 2141..2243 CDD:214555
SR 2250..2341 CDD:214555
SR 2359..2457 CDD:214555
SR 2570..2670 CDD:214555
SR 2675..2775 CDD:214555
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
11.000

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