Protein Alignment PNPase and RIF10

DIOPT Version :10

• Sequence 1: NP_651867.2
• Gene: PNPase / 43710
• FlyBaseID: FBgn0039846
• Length: 771
• Species: Drosophila melanogaster
• Sequence 2: NP_187021.2
• Gene: RIF10 / 821181
• AraportID: AT3G03710
• Length: 922
• Species: Arabidopsis thaliana
• Alignment Length: 792
• Identity: 269/792 - (33%)
• Similarity: 401/792 - (50%)
• Gaps: 91/792 - (11%)

  Fly    41 SVEVNFSNGRNMTFSSGRLARFANGTAVCQMGDTAVMVTAVAKAKPNPGQGFMPLVVDYRLKNAA 105
            ||::.|.| |.:...:|.:.|.|:.......|:|.|..:......|:....|:||.|.|:.:.:|
plant    89 SVKIPFGN-REILVETGLMGRQASSAVTVTDGETIVYTSVCLADVPSEPSDFLPLYVHYQERFSA 152

  Fly   106 SGRIPMNFMRRELGPSEKEILSARLIDRSLRPLFHKDYRTETQLVCNMLAMDAVHSPDVLAINAA 170
            .||....|.:||....:.|:|..|||||.|||...|.:..|||::..:|:.|.:|:||.||:.:|
plant   153 VGRTSGGFFKREGRTKDHEVLICRLIDRPLRPTMPKGFYNETQILSWVLSYDGLHAPDALAVTSA 217

  Fly   171 SMALSLSDIPWNGPIGAVRVGLCDGEVLINPTRRELQTSQLDLVVSATKQNLVVMLEGKGNVVLQ 235
            .:|::||::|....|..|||||..||.::|||.:|::.|||||.::.| ...::.:||..|.:.:
plant   218 GIAVALSEVPNAKAIAGVRVGLIGGEFIVNPTVKEMEESQLDLFLAGT-DTAILTIEGYSNFLPE 281

  Fly   236 QDLLKAIKQGTREAQFIIHEIERLQKAYGRQKREVEVAAEVDPELGKAVRSMCEMRLREIFQDST 300
            :.||:|:|.|....|.....||.|.|.||:.|. ::......|||.|.|:.:....|.:..|  .
plant   282 EMLLQAVKVGQDAVQATCIAIEVLAKKYGKPKM-LDAIRLPPPELYKHVKELAGEELTKALQ--I 343

  Fly   301 HDKMSRDNAVNEV----------RSNVIDKVWSSFPDTEPSLITEQ------------------- 336
            ..|:||..|::.:          :..|||:|.....:.:|.|:.::
plant   344 KSKISRRKAISSLEEKVLTILTEKGYVIDEVAFGTIEAQPDLLEDEDEDEEVVPEGEVDQGDVHI 408

  Fly   337 --------------------FNQTSRTIFRELIFERGLRCDGRDYDQLRNISCQVDMYKPLHGSA 381
                                |.:.|..:.|..|.|.|.|.|||..|::|.|:.:..:....|||.
plant   409 RPIPRKPIPLLFSEVDVKLVFKEVSSKLLRRRIVEGGKRSDGRTLDEIRPINSRCGLLPRAHGST 473

  Fly   382 LFQRGQTQVFCTVSLDSQESAMKLDSLAALDSGGLKAKNFMLHYEFPPYATGEVGRIGPVGRREM 446
            ||.||:||....|:|..::.|.::|:|...|    :.|.|.|.|.|||.:.|||||||...|||:
plant   474 LFTRGETQALAVVTLGDKQMAQRIDNLEGSD----EYKRFYLQYTFPPSSVGEVGRIGAPSRREI 534

  Fly   447 GHGALAERSLLPTLP--NDYPFTVRLTSEVLESNGSSSMASVCGGSLALMDAGVPVSAPAAGVAI 509
            |||.||||:|...||  :|:|:|:|:.|.|:||||||||||||||.|||.||||||....||:|:
plant   535 GHGTLAERALETILPSDDDFPYTIRVESTVIESNGSSSMASVCGGCLALQDAGVPVKCSVAGIAM 599

  Fly   510 GLV---TKFENDDTKHLQDYRILTDILGIEDYMGDMDMKVAGTRKGFTAIQADLKIPGIPLKVVM 571
            |:|   .:|..|.:.     .||:||.|.||..||||.||||...|.||.|.|:|:.||.|:::.
plant   600 GMVWDTEEFGGDGSP-----LILSDITGAEDASGDMDFKVAGNEDGVTAFQMDIKVGGITLEIME 659

  Fly   572 ESLQKATDAKSNILDIMSEAIREPRKYPKESWPVSETLTVEPQQRAQLIGPSGLHMKRIYLETGT 636
            ::|.:|...:.:||..|::....|.....:..|:...:.|.|.:...|||..|..:|.|..|:|.
plant   660 KALIQAKAGRRHILAEMAKCSPPPTLSLSKYAPLILIMKVHPSKVYSLIGSGGKKVKSIIEESGV 724

  Fly   637 -SLTAVDETHFNVFAPSQAAMDEAKELIEGYMVKERVPDLEFGGIY-TAKITELRDTGVMVILYP 699
             ::...|:....:.|...|:::.||.:|.|..:   ||.:  |.|| ..:|..:...|..|.:.|
plant   725 EAIDMQDDGTVKIMAIDVASLERAKAIISGLTM---VPSV--GDIYRNCEIKSMAPYGAFVEIAP 784

  Fly   700 SMPPALLHNSQLDQRKIAHPSALNLEVGQEIQVKYFGRDPVSGFMRLSRKVLQGPALGIPRS--- 761
            .. ..|.|.|:|....:|.|... .:||..|.||....:. .|.:|||.:.|      :|.|
plant   785 GR-EGLCHISELSAEWLAKPEDA-YKVGDRIDVKLIEVNE-KGQLRLSVRAL------LPESETD 840

  Fly   762 ----LNKSAGES 769
                ..:.||:|
plant   841 KDSQKQQPAGDS 852

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
PNPase	NP_651867.2	Pnp	41..750	CDD:440798	263/764 (34%)
RIF10	NP_187021.2	PLN00207	1..900	CDD:215104	269/792 (34%)