DRSC/TRiP Functional Genomics Resources

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Protein Alignment PNPase and pnpt1

DIOPT Version :9

Sequence 1:NP_001097990.2 Gene:PNPase / 43710 FlyBaseID:FBgn0039846 Length:771 Species:Drosophila melanogaster
Sequence 2:NP_001238761.1 Gene:pnpt1 / 100750260 -ID:- Length:776 Species:Danio rerio


Alignment Length:772 Identity:424/772 - (54%)
Similarity:550/772 - (71%) Gaps:25/772 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 KSLKLLNYRLK---CLSLSCPGGRRGIQSSSNGEAPSVEVNFSNGRNMTFSSGRLARFANGTAVC 69
            ||::::...:|   |.:..|  ..||||..      |..|...: |.:..|:|:||||::|.||.
Zfish    13 KSVRMMKMMMKTRLCWARVC--AVRGIQQH------SATVTLGD-RKLEISTGKLARFSDGCAVV 68

  Fly    70 QMGDTAVMVTAVAKAKPNPGQGFMPLVVDYRLKNAASGRIPMNFMRRELGPSEKEILSARLIDRS 134
            :.|:|:||||||:|::|...| |||||||||.|.||:||||.|.:|||||.::.|||::||||||
Zfish    69 KSGETSVMVTAVSKSRPAAAQ-FMPLVVDYRQKAAAAGRIPTNHLRRELGTTDTEILTSRLIDRS 132

  Fly   135 LRPLFHKDYRTETQLVCNMLAMDAVHSPDVLAINAASMALSLSDIPWNGPIGAVRVGLCDGEVLI 199
            :||||...|..:||::||:||.|.|:.|||||||.||.||:|||||||||||||||||.|||.||
Zfish   133 IRPLFPAGYFYDTQVMCNILAADGVNDPDVLAINGASAALTLSDIPWNGPIGAVRVGLLDGEFLI 197

  Fly   200 NPTRRELQTSQLDLVVSATKQNLVVMLEGKGNVVLQQDLLKAIKQGTREAQFII---HEIERLQK 261
            ||:|.|:..|.|:||::|...:.|||:|.....:||||...|:|.|.:..|.||   .:|.|..|
Zfish   198 NPSRSEMNRSSLNLVIAAAPSSHVVMIEAAAENILQQDFCHAVKLGVKHTQQIIQSLQQISRDMK 262

  Fly   262 AYGRQKREVEVAAEVDPELGKAVRSMCEMRLREIFQDSTHDKMSRDNAVNEVRSNVIDKVWSSFP 326
            ...|..|....||::.    :..|.:...|:..:|.|.||||:|||.|:|::|....:|:...||
Zfish   263 ISKRSSRLYTAAADMQ----EHTRLLASDRIYAVFTDFTHDKISRDEAINKIRLEAEEKIREKFP 323

  Fly   327 DTEPSLITEQFNQTSRTIFRELIFERGLRCDGRDYDQLRNISCQVDMYKPLHGSALFQRGQTQVF 391
            ..||..:.|.||..|:.|||:|:.:...||||||...||||||:||::||||||||||||||||.
Zfish   324 HAEPFEVMEAFNSVSKEIFRKLVLQEYRRCDGRDLTALRNISCEVDVFKPLHGSALFQRGQTQVL 388

  Fly   392 CTVSLDSQESAMKLDSLAALDSGGLKAKNFMLHYEFPPYATGEVGRIGPVGRREMGHGALAERSL 456
            |:|:.||.||::|.|.:.:..| |:|.|||:||||||||||.|:||.|...|||:|||||||::|
Zfish   389 CSVTFDSLESSLKTDVITSALS-GVKDKNFLLHYEFPPYATNEIGRTGGANRRELGHGALAEKAL 452

  Fly   457 LPTLPNDYPFTVRLTSEVLESNGSSSMASVCGGSLALMDAGVPVSAPAAGVAIGLVTKFENDDTK 521
            .|.:|:.:|||:|:|||||||||||||||||||||||||||||:|:|.|||||||:::...|...
Zfish   453 RPVIPSSFPFTIRVTSEVLESNGSSSMASVCGGSLALMDAGVPISSPVAGVAIGLISEAHPDRPS 517

  Fly   522 HLQDYRILTDILGIEDYMGDMDMKVAGTRKGFTAIQADLKIPGIPLKVVMESLQKATDAKSNILD 586
            .::.||:||||||||||.||||.|:||:.||.||:|||:||||:|||:|||::|:||.||..||.
Zfish   518 EIESYRLLTDILGIEDYNGDMDFKMAGSSKGITALQADVKIPGLPLKIVMEAIQQATVAKREILG 582

  Fly   587 IMSEAIREPRKYPKESWPVSETLTVEPQQRAQLIGPSGLHMKRIYLETGTSLTAVDETHFNVFAP 651
            ||.:.|..||...||:.||.|.:||...:||..|||.|::::|:..:||.:::.|||..|:||||
Zfish   583 IMGQCISRPRSSRKENGPVVENITVPLSRRALFIGPGGINLRRLQAQTGVTISQVDEQTFSVFAP 647

  Fly   652 SQAAMDEAKELIEGYMVKERVPDLEFGGIYTAKITELRDTGVMVILYPSMPPALLHNSQLDQRKI 716
            :.|||.||:|:|:.....::...||||.||||.|||:||.||||.|||:|.|.||||||||.::|
Zfish   648 TPAAMSEAQEIIKDTCRDDQEQQLEFGAIYTATITEIRDVGVMVKLYPNMSPVLLHNSQLDHKRI 712

  Fly   717 AHPSALNLEVGQEIQVKYFGRDPVSGFMRLSRKVLQGPALGIPRSLNK----SAGES 769
            .|||||.|:|||:||||||||||..|.||||||||..|...:.:||::    |.|.|
Zfish   713 QHPSALGLDVGQQIQVKYFGRDPTDGRMRLSRKVLLSPTATLAKSLSERHSISVGSS 769

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PNPaseNP_001097990.2 PRK11824 42..751 CDD:236995 406/711 (57%)
pnpt1NP_001238761.1 PRK11824 40..748 CDD:236995 408/720 (57%)
RNase_PH_PNPase_1 40..247 CDD:206768 120/214 (56%)
PNPase 284..357 CDD:281688 30/72 (42%)
RNase_PH_PNPase_2 361..591 CDD:206769 154/230 (67%)
KH-I 600..660 CDD:294072 28/59 (47%)
S1_like 674..744 CDD:299122 51/69 (74%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H12404
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D175537at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
22.010

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