DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gcn2 and eif2ak1

DIOPT Version :9

Sequence 1:NP_001263142.1 Gene:Gcn2 / 43709 FlyBaseID:FBgn0019990 Length:1591 Species:Drosophila melanogaster
Sequence 2:NP_001039038.1 Gene:eif2ak1 / 733794 XenbaseID:XB-GENE-962479 Length:631 Species:Xenopus tropicalis


Alignment Length:624 Identity:178/624 - (28%)
Similarity:267/624 - (42%) Gaps:158/624 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   406 GNVRVSDFSLVPNLLELLSGAGQSSSCGDLPALGALVESLMPTNSYEMRDFVDKCNSDRTLSASE 470
            |..|..:.:.|||.|.|:|                |||.|.         :|.:.|..|.....:
 Frog    51 GQRRFPNVTTVPNQLLLVS----------------LVEHLC---------YVHEQNPQRAKHLFK 90

  Fly   471 LLEHPFLRF-----YVDNGQQQVMPLPQ-----------QQHPNTVQRTGSAMPYQI----PTLA 515
            ||.|.|.|.     :..:.:...:.|..           ::|..|.:.|...:.:.|    ..|:
 Frog    91 LLCHTFTRMGLLTPFAFSDEFSTVRLQHSTAVTELLKAAKRHMYTEEITNGDLSFHISRAKKMLS 155

  Fly   516 LSQ-SRLRTEFEVLMYLGKGAFGDVLKVRNILDNREYAIKRIPLPARSRQLYKKMTREVELLSRL 579
            .:| ||...||:.:..||||.:|.|.||||.||.:.||||:|.:...||:..:|:.|||::|:.|
 Frog   156 ETQTSRYLNEFDEIAQLGKGGYGKVYKVRNKLDGQFYAIKKILIKKVSRRDCRKVLREVKVLAGL 220

  Fly   580 NHENVVRYFNSWIESVDDADAAEMDKLL----GGEWSQSQQDLSVKPAKSPQLGPT--LEEDEDE 638
            .|.|:|.|..:|:|.|...::  ..|||    |...::::||:  |..:|.:...:  :.||...
 Frog   221 QHPNIVGYHTAWMEHVQPPNS--QCKLLKAVKGSPNNKAEQDM--KEVRSVESSGSFIMFEDSAH 281

  Fly   639 EDSSSSMWNGYIPNMEDSDSDGIEFV----------DSNGKVA---------------------- 671
            :|.|:...:..: ||..|..|..:..          |||..||                      
 Frog   282 QDPSAQSVSESV-NMSVSSPDKPDHCIENAGNNYKKDSNANVAKKTKACSKSYQSQGLVCQRDKC 345

  Fly   672 ---VYDDEEQEDSTRGKTNSPKPL-----MQVMY-----IQMEFCEKCTLRTAIDDNL------- 716
               ..||.::.||:..:....|.|     .::.|     |||:.|||......::.|.       
 Frog   346 PFSSEDDVDKSDSSCDEECPQKDLCLHRHFEIQYHLMLHIQMKLCEKSLWDWIVERNNHFQESGN 410

  Fly   717 -----FNDTDRLWRLFREIAEGLAHIHQQGIIHRDLKPVNIFLDSHD-QIKIGDFGLATTSFLAL 775
                 |.|.....|:..:|.||:.:||...::||||||.|:||...| .::|||||||...... 
 Frog   411 SNPYDFVDVRITTRILYQILEGVRYIHSMEVLHRDLKPRNVFLHGADLHVRIGDFGLACRDIFQ- 474

  Fly   776 QAHDAAPAPVNQITSAEDGTGTGKVGTTLYVAPE-LTGNASKSVYNQKVDMYTLGIILFEMCQPP 839
            |:.|:    ..|...:...|.|..|||.||.||| |.|    |.|:.|.|||::||||.|:.| |
 Frog   475 QSRDS----WLQKDRSNGLTHTTGVGTCLYAAPEQLKG----SHYDFKSDMYSIGIILLELFQ-P 530

  Fly   840 FDTSMERAQTIMALRNVSINIPDAMLKDPKYEKTVKMLQW---------LLNHDPAQRPTAEELL 895
            |.|.|||.|.:.||||.::..        .||:     ||         |.:.:.::||:|.::|
 Frog   531 FGTEMERTQVLTALRNGTVPC--------SYER-----QWPVQSNFVKLLTSSECSERPSASQML 582

  Fly   896 ISDLVPPAQLEANELQ----------EMLRHALANPQSK 924
            .|.|....:....:||          |.|:.:|...|.:
 Frog   583 ESQLFHQKENLVQDLQKKVLYLEEENERLKRSLQKLQEQ 621

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gcn2NP_001263142.1 RWD 17..130 CDD:214735
PK_eIF2AK_GCN2_rpt1 261..476 CDD:270914 18/69 (26%)
STKc_EIF2AK4_GCN2_rpt2 518..898 CDD:270948 144/454 (32%)
S_TKc 525..895 CDD:214567 139/443 (31%)
HisS 974..1414 CDD:223202
class_II_aaRS-like_core 974..>1137 CDD:294192
eif2ak1NP_001039038.1 STKc_EIF2AK1_HRI 159..585 CDD:270951 143/453 (32%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D433474at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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