DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gcn2 and hri2

DIOPT Version :9

Sequence 1:NP_001263142.1 Gene:Gcn2 / 43709 FlyBaseID:FBgn0019990 Length:1591 Species:Drosophila melanogaster
Sequence 2:NP_593146.1 Gene:hri2 / 2541943 PomBaseID:SPAC222.07c Length:639 Species:Schizosaccharomyces pombe


Alignment Length:674 Identity:173/674 - (25%)
Similarity:288/674 - (42%) Gaps:186/674 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   414 SLVPNLLELLSGAGQSSS------CGDLPALGALVESLMPTNSYEMRDFVDKCNSDRTLSASELL 472
            :|:.|..:|.......|.      |..|..:|.|.|           :::::..:.|: :..:.|
pombe    45 ALLENFCQLYDNNPAKSKRLFALICHTLQKIGILEE-----------EYIEELAAVRS-NYQDAL 97

  Fly   473 EHPFLR----FYVDNGQQQVMPLPQQQHPNTV-----QRTGSAMPYQIPTLALSQSRLR------ 522
            .|..|:    ..:|:.:::::.||.   |..|     |.| :...:.:..|.:.|.|.|      
pombe    98 HHLILQAREAIRLDDAEERLLALPD---PTNVFEKFPQET-ALSKFSVDGLNVRQFRFRDLTLES 158

  Fly   523 ----------TEFEVLMYLGKGAFGDVLKVRNILDNREYAIKRIPLPARSRQL-YKKMTREVELL 576
                      .:||....||:|.||.|..|||.:|..|||:|:|  .:..:|: |.|:.||::.|
pombe   159 WLQSRNSRYIEDFEEYSLLGRGGFGSVYHVRNKIDGAEYAMKKI--NSTFQQMSYSKIFREIKCL 221

  Fly   577 SRLNHENVVRYFNSWIESVDDAD------AAEMDKLLGGEWSQSQQDLS------VKPAKSPQLG 629
            ::::|.||:|||:||:||..:|.      :....::||   :.|..|::      .:|.:|..|.
pombe   222 AKMDHPNVIRYFSSWVESTTEATQMPIVMSKNSSRVLG---TSSYCDVNGMDSIIFEPTESSALT 283

  Fly   630 PTL---EEDEDEEDSSSSMWNGYIPNMEDSDSDGIE----FVDSN----GKVAVYDDEEQED--- 680
            ..:   |:...|...|:|..:.|....|.|:.:.:|    ..|||    ....:.||:....   
pombe   284 DDILFAEDPGTESIISTSRKSSYSSTTESSNFENLESPRNLHDSNVSTFNNTTILDDDYSSSMHI 348

  Fly   681 STRGKTNSPKPLMQVMYIQMEFC----EKCTLR-------TAIDDNLFNDTDRLWRLFREIAEGL 734
            |..|.|:|     .::||||:.|    |...:|       ....:.:...||    |||.|..|:
pombe   349 SKTGPTHS-----FIIYIQMQLCFDDLESYLIRRNHFLSFPLCKEQIQLHTD----LFRMIINGV 404

  Fly   735 AHIHQ-QGIIHRDLKPVNIFL-----------------DSHD-----QIKIGDFGL--------- 767
            .::|: ..:||||:||.||||                 |.:|     ..|||||||         
pombe   405 MYVHEGVNLIHRDIKPSNIFLAKSLPEDRGSVPLISYNDKNDLKEYITPKIGDFGLVVENKKNTE 469

  Fly   768 ATTSFLALQAHDAAPAPVNQITSAEDGTGTGKVGTTLYVAPELTGNASKSVYN---QKVDMYTLG 829
            ...|||..          |.:.:.:|  .|..:||..|.||||. :|..|.:|   :|:|.::||
pombe   470 TALSFLER----------NHLPNLQD--ETQHIGTATYAAPELL-DAMSSQHNKFTKKIDTFSLG 521

  Fly   830 IILFEMCQPPFDTSMERAQTIMALRNVSINIPDAMLKDPKYEKTVKMLQWLLNHDPAQRPTAEEL 894
            ::|||:.. ||.|:||||..:..||..  |:|:..::....|.:  ::.|:...||.:||:..|:
pombe   522 MVLFELLH-PFQTNMERATKLQDLRRG--NLPEEFVEQHICESS--LILWMTAKDPTKRPSLLEV 581

  Fly   895 LISDLVPPAQLEANELQEMLRHALANPQSKAYKNLVARCLQQESDEVLEHTYHLGSSRAMKSWNS 959
            |...|:.|.|:....:                .|:|:             |.||.....||    
pombe   582 LNCGLLLPNQVSMPNI----------------SNIVS-------------TNHLDVETQMK---- 613

  Fly   960 AIIIDDIVSLNPVIEFVKAKVVNL 983
             :|:|:...|...|..:::::.:|
pombe   614 -LIMDENQRLREQIAVLRSRIQHL 636

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gcn2NP_001263142.1 RWD 17..130 CDD:214735
PK_eIF2AK_GCN2_rpt1 261..476 CDD:270914 12/67 (18%)
STKc_EIF2AK4_GCN2_rpt2 518..898 CDD:270948 137/468 (29%)
S_TKc 525..895 CDD:214567 133/442 (30%)
HisS 974..1414 CDD:223202 1/10 (10%)
class_II_aaRS-like_core 974..>1137 CDD:294192 1/10 (10%)
hri2NP_593146.1 STKc_EIF2AK 164..585 CDD:270898 134/452 (30%)
S_TKc 171..583 CDD:214567 133/443 (30%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0124
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11042
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2124
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.940

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