DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gcn2 and HARS2

DIOPT Version :10

Sequence 1:NP_001263142.1 Gene:Gcn2 / 43709 FlyBaseID:FBgn0019990 Length:1591 Species:Drosophila melanogaster
Sequence 2:NP_001350464.1 Gene:HARS2 / 23438 HGNCID:4817 Length:512 Species:Homo sapiens


Alignment Length:549 Identity:121/549 - (22%)
Similarity:220/549 - (40%) Gaps:83/549 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   902 PAQLEANELQEMLRHALANPQSKAYKNLVARCLQQ--ESDEVLEHTYHLGSSRAMKSWNSAIII- 963
            |.:..|:.|.::||...|:...      ..||..|  ||.:|.|..  |.|...........|| 
Human     8 PRRAWASLLSQLLRPPCASCTG------AVRCQSQGEESLQVAEAV--LTSQLKAHQEKPNFIIK 64

  Fly   964 --DDIVSLNPVIEFVKAKVVNL----FRKHGAIEVDSPLLSPLSARNSTANANANAVH-LMTHSG 1021
              .....|:|....|:.|:::|    |::|||..:|:|..............::..:: |....|
Human    65 TPKGTRDLSPQHMVVREKILDLVISCFKRHGAKGMDTPAFELKETLTEKYGEDSGLMYDLKDQGG 129

  Fly  1022 CVVVLPCDLRTQFARHVTMNSVNLIRRYCVDRVYREE--RVFNFHPKQSYDCSFDIIAPTTGSHL 1084
            .::.|..||...|||::.||.|..::||.|.:|:|.|  .:.....::...|.|| ||......:
Human   130 ELLSLRYDLTVPFARYLAMNKVKKMKRYHVGKVWRRESPTIVQGRYREFCQCDFD-IAGQFDPMI 193

  Fly  1085 VDAELLSLAFEITSELPRLREKNLAIRMNHTNLLRAILIFCNVPKAQYGALFEGTMDFIESRISR 1149
            .|||.|.:..||   |..|:..:..|::|...::..:...|.||::::.|:. .::|.::....:
Human   194 PDAECLKIMCEI---LSGLQLGDFLIKVNDRRIVDGMFAVCGVPESKFRAIC-SSIDKLDKMAWK 254

  Fly  1150 FQFHSSITGIMEKSRTSAQTLMDMLLANFLLTGSRSTVDD-------SALKSLMRGKGEAASLAR 1207
            ...|..:.     .:..|..:.|.:.......|..|.|:.       |..|..:.|.|:..    
Human   255 DVRHEMVV-----KKGLAPEVADRIGDYVQCHGGVSLVEQMFQDPRLSQNKQALEGLGDLK---- 310

  Fly  1208 GALRELETVVGLAYSLGVKCPIHIWAGLPISFDRA-SNG-----GIVWQMTADLKPNRSGHPSV- 1265
             .|.|..|:.|:|..              ||||.: :.|     |::::......|.::|...: 
Human   311 -LLFEYLTLFGIADK--------------ISFDLSLARGLDYYTGVIYEAVLLQTPTQAGEEPLN 360

  Fly  1266 ---LAIGERYDSMLHEFQKQAQKFNPAMPARGVLSGAGLTFSL-DKLVAAVGVEYAKDCRAIDVG 1326
               :|.|.|||.::..|..:..|    :|..|:..|....|.: ::.:...|    :..|..:..
Human   361 VGSVAAGGRYDGLVGMFDPKGHK----VPCVGLSIGVERIFYIVEQRMKTKG----EKVRTTETQ 417

  Fly  1327 ICVCGTRPP-LKDVTYIMRLLWSVGIRCGIV-EAASELGDEAQDLARLGALHVILVAE----NGS 1385
            :.|...:.. |::...::..||..||:..:: :...:|..:.......|...|:::.|    .|.
Human   418 VFVATPQKNFLQERLKLIAELWDSGIKAEMLYKNNPKLLTQLHYCESTGIPLVVIIGEQELKEGV 482

  Fly  1386 LRVRSFERERFQERHLTRTELVEFIQKML 1414
            :::||....  :|..:.|...|..|||.|
Human   483 IKIRSVASR--EEVAIKRENFVAEIQKRL 509

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gcn2NP_001263142.1 RWD_GCN2 11..131 CDD:467659
PK_eIF2AK_GCN2_rpt1 261..476 CDD:270914
STKc_EIF2AK4_GCN2_rpt2 518..898 CDD:270948
class_II_aaRS-like_core 974..>1137 CDD:444800 45/169 (27%)
PRK12420 1029..1392 CDD:237097 83/388 (21%)
HARS2NP_001350464.1 PLN02972 <12..510 CDD:215525 120/545 (22%)
Blue background indicates that the domain is not in the aligned region.

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