DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gcn2 and Y38E10A.8

DIOPT Version :9

Sequence 1:NP_001263142.1 Gene:Gcn2 / 43709 FlyBaseID:FBgn0019990 Length:1591 Species:Drosophila melanogaster
Sequence 2:NP_496691.3 Gene:Y38E10A.8 / 189655 WormBaseID:WBGene00012586 Length:289 Species:Caenorhabditis elegans


Alignment Length:401 Identity:91/401 - (22%)
Similarity:140/401 - (34%) Gaps:155/401 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly   525 FEVLMYLGKGAFGDVLKVRNILDNREYAIKRIPLPARSRQLYKKMTREVELLSRLNHENVVRYFN 589
            ::|:..||:|:||.|.:.:...|....|:||:.|.:.:   ..:..|||..::.:...       
 Worm    18 YDVVDVLGQGSFGIVFQAQRKNDRELRAVKRLDLDSAT---LPRAAREVTTITSIGRH------- 72

  Fly   590 SWIESVDDADAAEMDKLLGGEWSQSQQDLSVKPAKSPQLGPTLEEDEDEEDSSSSMWNGYIPNME 654
                                                                     :|||    
 Worm    73 ---------------------------------------------------------SGYI---- 76

  Fly   655 DSDSDGIEFVDSNGKVAVYDD---EEQEDSTRGKTNSPKPLMQVMYIQMEFCEKCTLRTAIDDNL 716
                             .:|:   :|.:..:.|.          |||.||.||:.||:..|..|.
 Worm    77 -----------------FFDEVFWKEHKTGSAGH----------MYICMELCEQNTLKDWIKGNR 114

  Fly   717 FNDTDRLWRL----FREIAEGLAHIHQQGIIHRDLKPVNIFLDSHDQ---IKIGDFGLATTSFLA 774
             ....|.|.|    .:::|..|.|:|....|||||||.|:|.....|   :|||||||.|.:...
 Worm   115 -TARSRPWMLMKDWIKQLACALDHLHSNNFIHRDLKPENVFFARDSQFKKLKIGDFGLTTRAIEG 178

  Fly   775 LQAHDAAPAPVNQITSAEDG--TGTGKVGTTLYVAPELTGNASKSVYNQKVDMYTLGIILFEMCQ 837
            |:       ...|.|.:::.  ..|...||..|:|||...|.    ||:|||::.||:|..|:  
 Worm   179 LK-------DWKQRTQSQEAGQNHTAGAGTPSYMAPEQIRNQ----YNEKVDIFALGLIAAEL-- 230

  Fly   838 PPFDTSMERAQTIMALRNVSINIP-DAM------------LKDPKYEKTVKMLQWLLNHDPAQRP 889
                              :.||.| |.|            :....|...::.|..|.:.:|..||
 Worm   231 ------------------IIINTPSDEMGTNDIIRSGQWPIAWQDYPDAIEFLSQLTHMNPTMRP 277

  Fly   890 TAEELLISDLV 900
            :|.|:.:...|
 Worm   278 SAVEVSMHPFV 288

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gcn2NP_001263142.1 RWD 17..130 CDD:214735
PK_eIF2AK_GCN2_rpt1 261..476 CDD:270914
STKc_EIF2AK4_GCN2_rpt2 518..898 CDD:270948 90/397 (23%)
S_TKc 525..895 CDD:214567 90/394 (23%)
HisS 974..1414 CDD:223202
class_II_aaRS-like_core 974..>1137 CDD:294192
Y38E10A.8NP_496691.3 PKc_like 14..285 CDD:389743 90/396 (23%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D433474at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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