DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Gcn2 and zyg-1

DIOPT Version :10

Sequence 1:NP_001263142.1 Gene:Gcn2 / 43709 FlyBaseID:FBgn0019990 Length:1591 Species:Drosophila melanogaster
Sequence 2:NP_495103.1 Gene:zyg-1 / 173956 WormBaseID:WBGene00006988 Length:706 Species:Caenorhabditis elegans


Alignment Length:732 Identity:143/732 - (19%)
Similarity:246/732 - (33%) Gaps:289/732 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly   517 SQSRLRTEFEVLMYLGKGAFGDVLKVRNILDNRE-YAIKRIPLPARSRQLYKKMTREVELLSRLN 580
            |.||| :.:..|..:|||.||.|...:.  :|.| .|||||.         ||:.:         
 Worm     6 SGSRL-SAYSHLKEIGKGGFGVVYAAQR--ENGEKVAIKRID---------KKVPK--------- 49

  Fly   581 HENVVRYFNSWIESVDDADAAEMDKLLGGEWSQSQQDLSVKPAKSPQLGPTLEEDEDEEDSSSSM 645
              |.|                         |::.|....:|.:|                     
 Worm    50 --NRV-------------------------WTEIQTMKELKKSK--------------------- 66

  Fly   646 WNGYIPNMEDSDSDGIEFVDSNGKVAVYDDEEQEDSTRGKTNSPKPLMQVMYIQMEFCEKCTLRT 710
               |:          :||         |:|..::..|              ||.||.||..:|:.
 Worm    67 ---YV----------VEF---------YEDFVEDGYT--------------YIVMELCEGGSLQA 95

  Fly   711 AIDDNLFNDTDRLWRLFREIAEGLAHIHQQGIIHRDLKPVNIFL-DSHDQ---IKIGDFGLATTS 771
            .:.::...|......:.|::...::.:|:..:|||||...|:|: ||..:   :|:|||||||| 
 Worm    96 YVREHGALDDATAVHVLRQLISAVSFMHRVNVIHRDLSAGNVFIKDSKKKKMTVKLGDFGLATT- 159

  Fly   772 FLALQAHDAAPAPVNQITSAEDGTGTGK-----VGTTLYVAPELTGNASKSVYNQKVDMYTLGII 831
                                   .|.|:     |||..::||::....    |.|..|:|:||.:
 Worm   160 -----------------------LGRGETTCTIVGTPGFIAPQVYDQE----YTQSADVYSLGAV 197

  Fly   832 LFEM----------CQPPFDTSMERAQTIMALRNVS----INIPDAMLKDPKYEKT--------- 873
            |:.|          ..|....|...|:.:..:.:..    |.:...:|.:..||.|         
 Worm   198 LYTMLTARNPPPKGLPPTCGMSPNAARLVEQMMDTDAKKRIPLTQIVLSEFMYENTNENAVIFSR 262

  Fly   874 --------------VKMLQWLLNHD----------PA--------QRPTAEELLISD-------- 898
                          |:..:...:.|          ||        .||..:.:..:.        
 Worm   263 EHSRDGRRQRSREPVRSSRDDRSRDGRALIRSSSQPAHSGRAPLSNRPIHDRMPSTSSRGFDSER 327

  Fly   899 -----------LVPPAQLEAN--------------------------ELQEMLRHALANPQSKAY 926
                       .|||::.:.|                          ||....|..:|     |.
 Worm   328 GRERDRDSGRGTVPPSREDRNRSQLWPIRMDRLEGQRVCTAGGRYIVELDTRCRFEVA-----AQ 387

  Fly   927 KNLVARCLQQESDEVLEHTY-HLGSSRAMKSWNSAIIIDDIVSL--NPVI----EFVKAKVVNLF 984
            .|.|.|.|..|.||:::..| |....|.::..|..   :::::|  ||.:    ..:..:|.|.:
 Worm   388 GNFVKRILIVEVDEMVQTVYVHRIPDRTVRGRNGE---EELITLTNNPFVYTSYSQMPKEVQNDY 449

  Fly   985 ---RKHGAIEVDSPLLSPLSARNSTANANANAVHLMTHSGCVVVLPCDL---------------- 1030
               :|..|:.: |..::.::.|..:...:|.| .||.:....:.||..:                
 Worm   450 MRLQKMVAVTI-SGRVAKVTFRRPSQFPDAQA-QLMENGDLRIKLPRSVIVRKMDNGEIFNCIDG 512

  Fly  1031 ---RTQFARHVTMNSVNLIRRYCVDRVYREERVFNFHPKQSYDCSFDIIAPTTGSHLVDAELLSL 1092
               :.|....:|:..||.:.:|.:    |.|:..| ...:...| |.|:. :.|:::|.:...||
 Worm   513 IATQKQAVSGITLTKVNEVYKYLI----RFEQCLN-GMDRGMVC-FPIVF-SAGTNMVGSSPSSL 570

  Fly  1093 AFEITSELPRLREKNLA 1109
            ....:|:..|....||:
 Worm   571 MPSGSSQTSRFPFSNLS 587

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gcn2NP_001263142.1 RWD_GCN2 11..131 CDD:467659
PK_eIF2AK_GCN2_rpt1 261..476 CDD:270914
STKc_EIF2AK4_GCN2_rpt2 518..898 CDD:270948 88/444 (20%)
class_II_aaRS-like_core 974..>1137 CDD:444800 31/158 (20%)
PRK12420 1029..1392 CDD:237097 19/100 (19%)
zyg-1NP_495103.1 S_TKc 13..249 CDD:214567 76/367 (21%)
Polo_box_2 351..460 CDD:408318 23/116 (20%)
Polo_box_3 463..561 CDD:408331 19/105 (18%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.