DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG1607 and GAP1

DIOPT Version :9

Sequence 1:NP_001263139.1 Gene:CG1607 / 43707 FlyBaseID:FBgn0039844 Length:507 Species:Drosophila melanogaster
Sequence 2:NP_012965.3 Gene:GAP1 / 853912 SGDID:S000001747 Length:602 Species:Saccharomyces cerevisiae


Alignment Length:489 Identity:102/489 - (20%)
Similarity:193/489 - (39%) Gaps:102/489 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    57 VIVGSIIGSGIFVSPTGVLMYTGSVNLALIVWVISG--LFSMVGAYCYAELGTMITKSG--ADYA 117
            :.:|..||:|:.|. :|..:.||.....||.|..:|  :::||.|  ..||..:...||  ..||
Yeast    98 IAIGGAIGTGLLVG-SGTALRTGGPASLLIGWGSTGTMIYAMVMA--LGELAVIFPISGGFTTYA 159

  Fly   118 --YIMETFGPFMAFIRLWIECMIVRPCSQAIVALTFSTYVLKPFFPECTPPEDSARLLAVCCILV 180
              :|.|:|| :.......::.::|.|......::|.:.:        .|.|:.....:|:.. |.
Yeast   160 TRFIDESFG-YANNFNYMLQWLVVLPLEIVSASITVNFW--------GTDPKYRDGFVALFW-LA 214

  Fly   181 LTLINCWDVKWATAVQDIFTYAKLLAL--FIIIA---------TGVYQLYLGNTQY-----FTFE 229
            :.:||.:.||.....:.:|::.|::.:  |||:.         ||.   |:|...:     |..:
Yeast   215 IVIINMFGVKGYGEAEFVFSFIKVITVVGFIILGIILNCGGGPTGG---YIGGKYWHDPGAFAGD 276

  Fly   230 NTDTKVTSIALSFYSGLFAYNGWNYLNFIIEELKDPVKNLPRAIAISCTLVTIVYVMANVSFYTI 294
            ....|...:...|.:..|::.|...:.....|..:|.|::|:|.......:|:.|:: ::....:
Yeast   277 TPGAKFKGVCSVFVTAAFSFAGSELVGLAASESVEPRKSVPKAAKQVFWRITLFYIL-SLLMIGL 340

  Fly   295 LSP---DEVMGSSAV-----AVTYAERAFGM--LAWTIPVFVALSTFGAVNGILLTSSRLFYAGA 349
            |.|   ..::|:|:|     ....|.:..|:  |...:.|.:.::.....|..:...||...|.|
Yeast   341 LVPYNDKSLIGASSVDAAASPFVIAIKTHGIKGLPSVVNVVILIAVLSVGNSAIYACSRTMVALA 405

  Fly   350 NNGQMPEILTMIQIQRFTPTPAVLAMALLSMLYLTVSDIFALINYVGFA-------TWLSI--GV 405
            ....:|||.:.:. ::..|           ::.:.|:..|.||.:|..:       .||..  |:
Yeast   406 EQRFLPEIFSYVD-RKGRP-----------LVGIAVTSAFGLIAFVAASKKEGEVFNWLLALSGL 458

  Fly   406 AVL------CLPWLRWAQP-----------NLPRPIRV-----PMVFPIVYLIATIFVTVVPMYA 448
            :.|      |:..:|:.:.           :...|..|     .:...|:..||..:|.|.|:..
Yeast   459 SSLFTWGGICICHIRFRKALAAQGRGLDELSFKSPTGVWGSYWGLFMVIIMFIAQFYVAVFPVGD 523

  Fly   449 SPVETGYGILMILSSIPVYLVFIA--------WK 474
            ||  :..|......|.|:.:|...        ||
Yeast   524 SP--SAEGFFEAYLSFPLVMVMYIGHKIYKRNWK 555

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1607NP_001263139.1 2A0308 42..501 CDD:273332 102/489 (21%)
GAP1NP_012965.3 LysP 43..601 CDD:223903 102/489 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53617
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

Return to query results.
Submit another query.