DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG1607 and GNP1

DIOPT Version :9

Sequence 1:NP_001263139.1 Gene:CG1607 / 43707 FlyBaseID:FBgn0039844 Length:507 Species:Drosophila melanogaster
Sequence 2:NP_010796.1 Gene:GNP1 / 852121 SGDID:S000002916 Length:663 Species:Saccharomyces cerevisiae


Alignment Length:557 Identity:114/557 - (20%)
Similarity:200/557 - (35%) Gaps:138/557 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 TESLNRKNSS--------RKSSIVNGNG------DASAKLTNGDGDGGGDGGGEVTLKAKMSLLN 53
            |..::.|:||        ||||.:..:|      :...|..|              ||..:...:
Yeast   103 TTPISTKDSSSQLDNELNRKSSYITVDGIKQSPQEQEQKQEN--------------LKKSIKPRH 153

  Fly    54 GCTVIVGSIIGSGIFVSPTGVLMYTGSVNLALIVWVISGLFSMVGAYC-----------YAELGT 107
            ...:.:|:.||:|:.|..:.||...|...| :|.:.|.|  |.|  ||           |::|  
Yeast   154 TVMMSLGTGIGTGLLVGNSKVLNNAGPGGL-IIGYAIMG--SCV--YCIIQACGELAVIYSDL-- 211

  Fly   108 MITKSGADYAYIMETFGPFMAFIRLWIEC---MIVRPCSQAIVALTFSTYVLKPFFPECTPPEDS 169
                .|....|.:....|.:.|...|:.|   :.|.|......::|..      ::.....|:  
Yeast   212 ----IGGFNTYPLFLVDPALGFSVAWLFCLQWLCVCPLELVTASMTIK------YWTTSVNPD-- 264

  Fly   170 ARLLAVCCILVLTLINCWDVKWATAVQDIFTYAKLLAL--FIIIATGV------YQLYLGNTQY- 225
              :..|...:::.:||.:..|........|...|:|.:  |.|:|..:      ...|:|:..: 
Yeast   265 --VFVVIFYVLIVVINVFGAKGYAEADFFFNCCKILMIVGFFILAIIIDCGGAGTDGYIGSKYWR 327

  Fly   226 ----FTFENTDTKVTSIALSFYSGLFAYNGWNYLNFIIEELKDPVKNLPRAIAISCTLVTIVYV- 285
                |..:....:...:..:|.:..||:.....|.....|..:|.|.:|.|.......:..|:: 
Yeast   328 DPGAFRGDTPIQRFKGVVATFVTAAFAFGMSEQLAMTASEQSNPRKAIPSAAKKMIYRILFVFLA 392

  Fly   286 -MANVSFYTILSPDEVMGSSAVA-------VTYAERAFGMLAWTIPVFVALSTFGAVNGILLTSS 342
             :..|.|....:.|:::|::..|       :..:.....::...|...:.||.....||...|||
Yeast   393 SLTLVGFLVPYTSDQLLGAAGSATKASPYVIAVSSHGVRVVPHFINAVILLSVLSVANGAFYTSS 457

  Fly   343 RLFYAGANNGQMPEILTMIQIQRFTPTPAVLAMALLSMLYLTVS-----DIFA-LINYVGFA--- 398
            |:..:.|..|..|:....|. :...|..|:|..||..::....|     |:|. |:...|.:   
Yeast   458 RILMSLAKQGNAPKCFDYID-REGRPAAAMLVSALFGVIAFCASSKKEEDVFTWLLAISGLSQLF 521

  Fly   399 TWLSIGVAVLCLPWLRWAQPNLPRPIRV---------------------PMVFPIVYLIATIFVT 442
            ||::|     ||..:|:.     |.::|                     .::..::.|||..:|.
Yeast   522 TWITI-----CLSHIRFR-----RAMKVQGRSLGEVGYKSQVGVWGSAYAVLMMVLALIAQFWVA 576

  Fly   443 VVPMYASPVETGYGILMILSSIPVYLVFIAWKNKPIW 479
            :.|:      .|.|.|...|....||..      |||
Yeast   577 IAPI------GGGGKLSAQSFFENYLAM------PIW 601

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1607NP_001263139.1 2A0308 42..501 CDD:273332 103/504 (20%)
GNP1NP_010796.1 2A0310 146..626 CDD:273334 102/500 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C157345698
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53617
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2200
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.880

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